Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00008 and RBAM_000070

See DNA alignment / Visit BSNT_00008 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:46
# Commandline: needle
#    -asequence pep-align/BSNT_00008___gyrA.1.9828.seq
#    -bsequence pep-align/RBAM_000070___gyrA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00008___gyrA-RBAM_000070___gyrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00008___gyrA-RBAM_000070___gyrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00008___gyrA
# 2: RBAM_000070___gyrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 821
# Identity:     745/821 (90.7%)
# Similarity:   769/821 (93.7%)
# Gaps:          28/821 ( 3.4%)
# Score: 3747.5
# 
#
#=======================================

BSNT_00008___      1 MSEQNTPQVREINISQEMRTSFLDYAMSVIVSRALPDVRDGLKPVHRRIL     50
                                               ||||||||||||||||||||||||
RBAM_000070__      1 --------------------------MSVIVSRALPDVRDGLKPVHRRIL     24

BSNT_00008___     51 YAMNDLGMTSDKPYKKSARIVGEVIGKYHPHGDSAVYESMVRMAQDFNYR    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000070__     25 YAMNDLGMTSDKPYKKSARIVGEVIGKYHPHGDSAVYESMVRMAQDFNYR     74

BSNT_00008___    101 YMLVDGHGNFGSVDGDSAAAMRYTEARMSKISMEILRDITKDTIDYQDNY    150
                     |||||||||||||||||||||||||||||||:||||||||||||||||||
RBAM_000070__     75 YMLVDGHGNFGSVDGDSAAAMRYTEARMSKIAMEILRDITKDTIDYQDNY    124

BSNT_00008___    151 DGSEREPVVMPSRFPNLLVNGAAGIAVGMATNIPPHQLGEIIDGVLAVSE    200
                     ||:|||||||||||||||||||||||||||||||||||||:|:|||||||
RBAM_000070__    125 DGAEREPVVMPSRFPNLLVNGAAGIAVGMATNIPPHQLGEVIEGVLAVSE    174

BSNT_00008___    201 NPDITIPELMEVIPGPDFPTAGQILGRSGIRKAYESGRGSITIRAKAEIE    250
                     ||:||..||||.||||||||||||||||||||||||||||||||||||||
RBAM_000070__    175 NPEITNQELMEYIPGPDFPTAGQILGRSGIRKAYESGRGSITIRAKAEIE    224

BSNT_00008___    251 QTSSGKERIIVTELPYQVNKAKLIEKIADLVRDKKIEGITDLRDESDRTG    300
                     :||||||||||||||||||||:||||||||||||||||||||||||||.|
RBAM_000070__    225 ETSSGKERIIVTELPYQVNKARLIEKIADLVRDKKIEGITDLRDESDRNG    274

BSNT_00008___    301 MRIVIEIRRDANANVILNNLYKQTALQTSFGINLLALVDGQPKVLTLKQC    350
                     |||||||||||||:|||||||||||||||||||||||||||||||:||||
RBAM_000070__    275 MRIVIEIRRDANAHVILNNLYKQTALQTSFGINLLALVDGQPKVLSLKQC    324

BSNT_00008___    351 LEHYLDHQKVVIRRRTAYELRKAEARAHILEGLRVALDHLDAVISLIRNS    400
                     ||||||||||||||||||||||||||||||||||:|||||||||||||||
RBAM_000070__    325 LEHYLDHQKVVIRRRTAYELRKAEARAHILEGLRIALDHLDAVISLIRNS    374

BSNT_00008___    401 QTAEIARTGLIEQFSLTEKQAQAILDMRLQRLTGLEREKIEEEYQSLVKL    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
RBAM_000070__    375 QTAEIARTGLIEQFSLTEKQAQAILDMRLQRLTGLEREKIEEEYQSLVAL    424

BSNT_00008___    451 IAELKDILANEYKVLEIIREELTEIKERFNDERRTEIVTSGLETIEDEDL    500
                     |||||||||||.:|||||||||.|||||||||||||||||||||||||||
RBAM_000070__    425 IAELKDILANEARVLEIIREELNEIKERFNDERRTEIVTSGLETIEDEDL    474

BSNT_00008___    501 IERENIVVTLTHNGYVKRLPASTYRSQKRGGKGVQGMGTNEDDFVEHLIS    550
                     |||||||:||||||||||||||||||||||||||||||||||||||||||
RBAM_000070__    475 IERENIVITLTHNGYVKRLPASTYRSQKRGGKGVQGMGTNEDDFVEHLIS    524

BSNT_00008___    551 TSTHDTILFFSNKGKVYRAKGYEIPEYGRTAKGIPIINLLEVEKGEWINA    600
                     ||||||||||||||||||:|||||||||||||||||||||||||||||||
RBAM_000070__    525 TSTHDTILFFSNKGKVYRSKGYEIPEYGRTAKGIPIINLLEVEKGEWINA    574

BSNT_00008___    601 IIPVTEFNAELYLFFTTKHGVSKRTSLSQFANIRNNGLIALSLREDDELM    650
                     ||||:.|:.|.|||||||.||||||:|||||||||||||||.||||||||
RBAM_000070__    575 IIPVSTFDEEQYLFFTTKQGVSKRTALSQFANIRNNGLIALGLREDDELM    624

BSNT_00008___    651 GVRLTDGTKQIIIGTKNGLLIRFPETDVREMGRTAAGVKGITLTDDDVVV    700
                     .||||||.|||||||||||||||||.|||:||||||||||||||||||||
RBAM_000070__    625 AVRLTDGKKQIIIGTKNGLLIRFPEEDVRQMGRTAAGVKGITLTDDDVVV    674

BSNT_00008___    701 GMEILEEESHVLIVTEKGYGKRTPAEEYRTQSRGGKGLKTAKITENNGQL    750
                     |||||||:||||||||.||||||||.|||.||||||||||.|||::||.|
RBAM_000070__    675 GMEILEEDSHVLIVTENGYGKRTPASEYRVQSRGGKGLKTCKITDSNGPL    724

BSNT_00008___    751 VAVKATKGEEDLMIITASGVLIRMDINDISITGRVTQGVRLIRMAEEEHV    800
                     |.||||||||||||||||||||||||||||.|||||||||||||:::|||
RBAM_000070__    725 VTVKATKGEEDLMIITASGVLIRMDINDISTTGRVTQGVRLIRMSDQEHV    774

BSNT_00008___    801 ATVALVEKNEEDENEEEQEEV    821
                     |||||||||||:  .||.|||
RBAM_000070__    775 ATVALVEKNEEE--PEETEEV    793


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