Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00006 and RBAM_000060
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:46
# Commandline: needle
# -asequence pep-align/BSNT_00006___gyrB.1.9828.seq
# -bsequence pep-align/RBAM_000060___gyrB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00006___gyrB-RBAM_000060___gyrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00006___gyrB-RBAM_000060___gyrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00006___gyrB
# 2: RBAM_000060___gyrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 638
# Identity: 605/638 (94.8%)
# Similarity: 624/638 (97.8%)
# Gaps: 0/638 ( 0.0%)
# Score: 3147.0
#
#
#=======================================
BSNT_00006___ 1 MEQQQNSYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSI 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000060__ 1 MEQQQNSYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSI 50
BSNT_00006___ 51 DEALAGYCTDINIQIEKDNSITVVDNGRGIPVGIHEKMGRPAVEVIMTVL 100
|||||||||||||:|||||||||.||||||||||.|||||||||||||||
RBAM_000060__ 51 DEALAGYCTDINIEIEKDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVL 100
BSNT_00006___ 101 HAGGKFDGSGYKVSGGLHGVGASVVNALSTELDVTVHRDGKIHRQTYKRG 150
||||||||||||||||||||||||||||||.||||||||||||.|.|:||
RBAM_000060__ 101 HAGGKFDGSGYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQAYERG 150
BSNT_00006___ 151 VPVTDLEIIGETDHTGTTTHFVPDPEIFSETTEYDYDLLANRVRELAFLT 200
|||.|||:||:||.|||.||||||||||.||..||||||:||||||||||
RBAM_000060__ 151 VPVADLEVIGDTDKTGTITHFVPDPEIFKETIVYDYDLLSNRVRELAFLT 200
BSNT_00006___ 201 KGVNITIEDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGE 250
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000060__ 201 KGVNITIEDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGE 250
BSNT_00006___ 251 KDGITVEVALQYNDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDY 300
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000060__ 251 KDGITVEVALQYNDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDY 300
BSNT_00006___ 301 ARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEAR 350
||:||:.|||||||||||||||||||||||||||||||||||||||||||
RBAM_000060__ 301 ARRKGIFKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEAR 350
BSNT_00006___ 351 TITDTLFSTAMETFMLENPDAAKKIVDKGLMAARARMAAKKARELTRRKS 400
||||||||:|:|||:|||||:|:|||:|||||||||||||||||||||||
RBAM_000060__ 351 TITDTLFSSALETFLLENPDSARKIVEKGLMAARARMAAKKARELTRRKS 400
BSNT_00006___ 401 ALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQAILPL 450
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000060__ 401 ALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQAILPL 450
BSNT_00006___ 451 RGKILNVEKARLDKILSNNEVRSMITALGTGIGEDFNLEKARYHKVVIMT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000060__ 451 RGKILNVEKARLDKILSNNEVRSMITALGTGIGEDFNLEKARYHKVVIMT 500
BSNT_00006___ 501 DADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAY 550
||||||||||||||||||||||:|||||||||||||||||||||||||||
RBAM_000060__ 501 DADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAY 550
BSNT_00006___ 551 NDKELEELLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVT 600
|||:|:||||.|||:||||||||||||||||||||||||||::||||||.
RBAM_000060__ 551 NDKQLDELLKELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVN 600
BSNT_00006___ 601 LEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLDI 638
||||||||||||||||||||||||||||||||||||||
RBAM_000060__ 601 LEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLDI 638
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