Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00005 and RBAM_000050

See DNA alignment / Visit BSNT_00005 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:46
# Commandline: needle
#    -asequence pep-align/BSNT_00005.1.9828.seq
#    -bsequence pep-align/RBAM_000050___yaaB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00005-RBAM_000050___yaaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00005-RBAM_000050___yaaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00005
# 2: RBAM_000050___yaaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 81
# Identity:      71/81 (87.7%)
# Similarity:    74/81 (91.4%)
# Gaps:           0/81 ( 0.0%)
# Score: 360.0
# 
#
#=======================================

BSNT_00005         1 MYIHLGDDFVVSTRDIVGIFDFKANMSPIVEEFLKKQKHKVVPSVNGTPK     50
                     |||||||||||||||||||||.|.|:||||||||.:||.|||||||||||
RBAM_000050__      1 MYIHLGDDFVVSTRDIVGIFDCKVNVSPIVEEFLDRQKEKVVPSVNGTPK     50

BSNT_00005        51 SIVVTVQNIYYSPLSSSTLKKRAQFMFEIDS     81
                     |||||.:|||||||||.|||||||||.||||
RBAM_000050__     51 SIVVTTENIYYSPLSSGTLKKRAQFMLEIDS     81


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