Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00005 and RBAM_000050
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:46
# Commandline: needle
# -asequence dna-align/BSNT_00005.1.9828.seq
# -bsequence dna-align/RBAM_000050___yaaB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00005-RBAM_000050___yaaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00005-RBAM_000050___yaaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00005
# 2: RBAM_000050___yaaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity: 216/246 (87.8%)
# Similarity: 216/246 (87.8%)
# Gaps: 0/246 ( 0.0%)
# Score: 960.0
#
#
#=======================================
BSNT_00005 1 TTGTATATTCATTTAGGTGATGACTTTGTGGTTTCAACACGAGATATTGT 50
||||||||||||||||||||.||||||||.|||||||||||.|||||.||
RBAM_000050__ 1 TTGTATATTCATTTAGGTGACGACTTTGTCGTTTCAACACGCGATATCGT 50
BSNT_00005 51 CGGCATTTTTGACTTTAAAGCCAACATGTCGCCTATTGTTGAAGAATTTC 100
||||||||||||||..||.|.|||..|.|||||.||||||||||||||||
RBAM_000050__ 51 CGGCATTTTTGACTGCAAGGTCAATGTATCGCCGATTGTTGAAGAATTTC 100
BSNT_00005 101 TGAAAAAACAGAAACACAAGGTGGTGCCTTCCGTAAACGGCACGCCCAAA 150
||.|.|.|||||||.|.||.||.|||||.|||||||||||||||||.||.
RBAM_000050__ 101 TGGACAGACAGAAAGAAAAAGTAGTGCCGTCCGTAAACGGCACGCCAAAG 150
BSNT_00005 151 TCTATCGTAGTCACGGTTCAGAATATATATTACTCTCCCTTATCTTCCAG 200
|||||||||||||||..|.|||||||||||||||||||||||||||||.|
RBAM_000050__ 151 TCTATCGTAGTCACGACTGAGAATATATATTACTCTCCCTTATCTTCCGG 200
BSNT_00005 201 CACATTAAAAAAACGTGCGCAATTTATGTTTGAAATAGATTCTTAG 246
||||.|.||.||||||||||||||||||||.|||||||||||||||
RBAM_000050__ 201 CACACTGAAGAAACGTGCGCAATTTATGTTAGAAATAGATTCTTAG 246
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