Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00004 and RBAM_000040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:46
# Commandline: needle
# -asequence pep-align/BSNT_00004___recF.1.9828.seq
# -bsequence pep-align/RBAM_000040___recF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00004___recF-RBAM_000040___recF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00004___recF-RBAM_000040___recF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00004___recF
# 2: RBAM_000040___recF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 370
# Identity: 349/370 (94.3%)
# Similarity: 361/370 (97.6%)
# Gaps: 0/370 ( 0.0%)
# Score: 1779.0
#
#
#=======================================
BSNT_00004___ 1 MYIQNLELSSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAK 50
||||||||:|||||:.||||||||||||||||||||||||||||||||||
RBAM_000040__ 1 MYIQNLELTSYRNYERAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAK 50
BSNT_00004___ 51 SHRTSNDKELIRWDKDYAKIEGRVMKQNGAIPMQLVISKKGKKGKVNHIE 100
||||||||||||||:|||||||||||:||.||||||||||||||||||||
RBAM_000040__ 51 SHRTSNDKELIRWDEDYAKIEGRVMKRNGDIPMQLVISKKGKKGKVNHIE 100
BSNT_00004___ 101 QQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDL 150
|||||||||||||||||||||||||||||||||||||||||||.|||:||
RBAM_000040__ 101 QQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSAVYLYDL 150
BSNT_00004___ 151 SLYQKILSQRNHFLKQLQTRKQTDRTMLDVLTDQLIEVAAKVVVKRLQFT 200
||||||||||||||||||:||||||||||||||||||.|||||.||||||
RBAM_000040__ 151 SLYQKILSQRNHFLKQLQSRKQTDRTMLDVLTDQLIEAAAKVVAKRLQFT 200
BSNT_00004___ 201 AQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKIGDSYQEAFSK 250
|||||||||||:||||||||||||||||||||||.||||||:||||:|||
RBAM_000040__ 201 AQLEKWAQPIHSGISRGLEELTLKYHTALDVSDPKDLSKIGNSYQESFSK 250
BSNT_00004___ 251 LREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEI 300
|:||||||||||.|||||||||||||||||||||||||||||||||||||
RBAM_000040__ 251 LKEKEIERGVTLFGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEI 300
BSNT_00004___ 301 DLIHEEIGEYPILLLDDVLSELDDYRQSHLLHTIQGRVQTFVTTTSVDGI 350
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000040__ 301 DLIHEEIGEYPILLLDDVLSELDDYRQSHLLHTIQGRVQTFVTTTSVDGI 350
BSNT_00004___ 351 DHETLRQAGMFRVQNGALVK 370
||:||.|||||||:||.|||
RBAM_000040__ 351 DHDTLHQAGMFRVENGTLVK 370
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Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.