Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00003 and RBAM_000030

See DNA alignment / Visit BSNT_00003 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:46
# Commandline: needle
#    -asequence pep-align/BSNT_00003___yaaA.1.9828.seq
#    -bsequence pep-align/RBAM_000030___yaaA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00003___yaaA-RBAM_000030___yaaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00003___yaaA-RBAM_000030___yaaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00003___yaaA
# 2: RBAM_000030___yaaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 71
# Identity:      68/71 (95.8%)
# Similarity:    69/71 (97.2%)
# Gaps:           0/71 ( 0.0%)
# Score: 348.0
# 
#
#=======================================

BSNT_00003___      1 MANPISIDTEMITLGQFLKLADVIQSGGMAKWFLSEHEVLVNDEPDNRRG     50
                     |||||||||||||||||||||||||||||||||||||||.||:|||||||
RBAM_000030__      1 MANPISIDTEMITLGQFLKLADVIQSGGMAKWFLSEHEVTVNNEPDNRRG     50

BSNT_00003___     51 RKLYVGDVVEIEGFGSFQVVN     71
                     |||||||||.|||||||||||
RBAM_000030__     51 RKLYVGDVVAIEGFGSFQVVN     71


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