Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00003 and RBAM_000030
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:46
# Commandline: needle
# -asequence dna-align/BSNT_00003___yaaA.1.9828.seq
# -bsequence dna-align/RBAM_000030___yaaA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00003___yaaA-RBAM_000030___yaaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00003___yaaA-RBAM_000030___yaaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00003___yaaA
# 2: RBAM_000030___yaaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 216
# Identity: 191/216 (88.4%)
# Similarity: 191/216 (88.4%)
# Gaps: 0/216 ( 0.0%)
# Score: 855.0
#
#
#=======================================
BSNT_00003___ 1 ATGGCAAATCCGATTTCAATTGATACAGAGATGATTACACTCGGACAATT 50
|||||||||||||||||.|||||||||||.||||||||.||.||.||.||
RBAM_000030__ 1 ATGGCAAATCCGATTTCGATTGATACAGAAATGATTACGCTTGGCCAGTT 50
BSNT_00003___ 51 CTTAAAATTAGCCGATGTGATTCAGTCTGGCGGTATGGCGAAGTGGTTTT 100
.||||||||||||||||||||||||||.|||||.|||||||||||||||.
RBAM_000030__ 51 TTTAAAATTAGCCGATGTGATTCAGTCCGGCGGCATGGCGAAGTGGTTTC 100
BSNT_00003___ 101 TAAGCGAGCATGAAGTGCTTGTGAACGATGAGCCGGACAACCGCCGGGGC 150
|.|||||||||||.|||..|||.|||.||||.||.|||||.|||||.|||
RBAM_000030__ 101 TGAGCGAGCATGAGGTGACTGTCAACAATGAACCTGACAATCGCCGCGGC 150
BSNT_00003___ 151 AGAAAGCTGTATGTTGGAGATGTGGTAGAGATTGAAGGATTTGGTTCATT 200
||||||||.||.||||||||.|||||.|.|||||||||||||||||||||
RBAM_000030__ 151 AGAAAGCTTTACGTTGGAGACGTGGTCGCGATTGAAGGATTTGGTTCATT 200
BSNT_00003___ 201 TCAAGTCGTCAATTAA 216
||||||||||||||||
RBAM_000030__ 201 TCAAGTCGTCAATTAA 216
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