Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00002 and RBAM_000020
See
DNA alignment /
Visit
BSNT_00002 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:46
# Commandline: needle
# -asequence pep-align/BSNT_00002___dnaN.1.9828.seq
# -bsequence pep-align/RBAM_000020___dnaN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00002___dnaN-RBAM_000020___dnaN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00002___dnaN-RBAM_000020___dnaN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00002___dnaN
# 2: RBAM_000020___dnaN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 378
# Identity: 360/378 (95.2%)
# Similarity: 372/378 (98.4%)
# Gaps: 0/378 ( 0.0%)
# Score: 1804.0
#
#
#=======================================
BSNT_00002___ 1 MKFTIQKDRLVESVQDVLKAVSSRTTIPILTGIKIVASDDGVSFTGSDSD 50
|||||||||||||||||||||||||||||||||||||||:||||||||||
RBAM_000020__ 1 MKFTIQKDRLVESVQDVLKAVSSRTTIPILTGIKIVASDEGVSFTGSDSD 50
BSNT_00002___ 51 ISIESFIPKEEGDKEIVTIEQPGSIVLQARFFSEIVKKLPMATVEIEVQN 100
||||||||||:.|||||||:||||||||||||||||||||||||||||||
RBAM_000020__ 51 ISIESFIPKEDDDKEIVTIDQPGSIVLQARFFSEIVKKLPMATVEIEVQN 100
BSNT_00002___ 101 QYLTIIRSGKAEFNLNGLDADEYPHLPQIEEHHAIQIPTDLLKNLIRQTV 150
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000020__ 101 QYLTIIRSGKAEFNLNGLDADEYPHLPQIEEHHAIQIPTDLLKNLIRQTV 150
BSNT_00002___ 151 FAVSTSETRPILTGVNWKVEQSELLCTATDSHRLALRKAKLDIPEDRSYN 200
||||.|||||||||||||||..||||||||||||||||||||||||.|||
RBAM_000020__ 151 FAVSASETRPILTGVNWKVENGELLCTATDSHRLALRKAKLDIPEDSSYN 200
BSNT_00002___ 201 VVIPGKSLTELSKILDDNQELVDIVITETQVLFKAKNVLFFSRLLDGNYP 250
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000020__ 201 VVIPGKSLTELSKILDDNQELVDIVITETQVLFKAKNVLFFSRLLDGNYP 250
BSNT_00002___ 251 DTTSLIPQDSKTEIIVNTKEFLQAIDRASLLAREGRNNVVKLSAKPAESI 300
||||||||:|||||:||||||||||||||||||||||||||||||||:|:
RBAM_000020__ 251 DTTSLIPQESKTEIVVNTKEFLQAIDRASLLAREGRNNVVKLSAKPADSL 300
BSNT_00002___ 301 EISSNSPEIGKVVEAIAADQIEGEELNISFSPKYMLDALKVLEGAEIRVS 350
|||||||||||||||:.||||:|||||||||||||:|||||||||:||:|
RBAM_000020__ 301 EISSNSPEIGKVVEAVLADQIDGEELNISFSPKYMMDALKVLEGADIRIS 350
BSNT_00002___ 351 FTGAMRPFLIRTPNDETIVQLILPVRTY 378
||||||||||||||||||||||||||||
RBAM_000020__ 351 FTGAMRPFLIRTPNDETIVQLILPVRTY 378
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.