Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06229 and BSU40530

See DNA alignment / Visit BSNT_06229 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:53
# Commandline: needle
#    -asequence pep-align/BSNT_06229.1.22522.seq
#    -bsequence pep-align/BSU40530___cotF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06229-BSU40530___cotF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06229-BSU40530___cotF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06229
# 2: BSU40530___cotF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 160
# Identity:     103/160 (64.4%)
# Similarity:   104/160 (65.0%)
# Gaps:          55/160 (34.4%)
# Score: 535.0
# 
#
#=======================================

BSNT_06229         0 --------------------------------------------------      0
                                                                       
BSU40530___co      1 MDERRTLAWHETLEMHELVAFQSNGLIKLKKMIREVKDPQLRQLYNVSIQ     50

BSNT_06229         1 -----MRELLPFFPQAPHREDEEEERADNPFYSGDLLGFAKTSVRSYAIA     45
                          :||||||||||||||||||||||||||||||||||||||||||||
BSU40530___co     51 GVEQNLRELLPFFPQAPHREDEEEERADNPFYSGDLLGFAKTSVRSYAIA    100

BSNT_06229        46 ITETATPQLRNVLVKQLNAAIQLHAHVYRYMYQHGYYPSYNLSELLKNDV     95
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU40530___co    101 ITETATPQLRNVLVKQLNAAIQLHAQVYRYMYQHGYYPSYNLSELLKNDV    150

BSNT_06229        96 RNANRAISMK    105
                     ||||||||||
BSU40530___co    151 RNANRAISMK    160


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