Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06229 and BSU40530
See
Amino acid alignment /
Visit
BSNT_06229 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:53
# Commandline: needle
# -asequence dna-align/BSNT_06229.1.22522.seq
# -bsequence dna-align/BSU40530___cotF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06229-BSU40530___cotF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06229-BSU40530___cotF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06229
# 2: BSU40530___cotF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 483
# Identity: 315/483 (65.2%)
# Similarity: 315/483 (65.2%)
# Gaps: 165/483 (34.2%)
# Score: 1563.0
#
#
#=======================================
BSNT_06229 0 -------------------------------------------------- 0
BSU40530___co 1 ATGGATGAACGCAGAACATTGGCTTGGCATGAAACATTAGAAATGCACGA 50
BSNT_06229 0 -------------------------------------------------- 0
BSU40530___co 51 GCTGGTTGCTTTTCAATCAAACGGACTCATTAAACTGAAGAAAATGATAA 100
BSNT_06229 0 -------------------------------------------------- 0
BSU40530___co 101 GAGAAGTAAAAGACCCTCAGCTCAGACAGCTTTATAACGTGTCTATTCAG 150
BSNT_06229 1 ---------------TTGAGAGAGCTTCTTCCGTTCTTTCCACAGGCTCC 35
|||||||||||||||||||||||||||||||||||
BSU40530___co 151 GGTGTTGAGCAAAATTTGAGAGAGCTTCTTCCGTTCTTTCCACAGGCTCC 200
BSNT_06229 36 GCACAGAGAAGATGAGGAAGAAGAACGCGCAGATAACCCATTTTACAGCG 85
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU40530___co 201 GCACAGAGAGGATGAGGAAGAAGAACGCGCAGATAACCCATTTTACAGCG 250
BSNT_06229 86 GTGACCTGCTCGGTTTTGCTAAAACATCTGTCCGCAGCTATGCCATCGCA 135
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU40530___co 251 GTGACCTGCTCGGTTTTGCCAAAACATCTGTCCGCAGCTATGCCATCGCA 300
BSNT_06229 136 ATTACAGAAACAGCAACACCTCAATTAAGAAACGTACTGGTCAAACAGCT 185
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40530___co 301 ATTACAGAAACAGCAACACCTCAATTAAGAAACGTACTGGTCAAACAGCT 350
BSNT_06229 186 GAATGCTGCCATCCAGCTGCACGCCCATGTTTATCGATACATGTATCAGC 235
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU40530___co 351 GAATGCTGCCATCCAGCTGCACGCCCAAGTTTATCGATACATGTATCAGC 400
BSNT_06229 236 ATGGATATTATCCGTCTTACAACCTTTCTGAACTGTTGAAAAACGATGTC 285
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40530___co 401 ATGGATATTATCCGTCTTACAACCTTTCTGAACTGTTGAAAAACGATGTC 450
BSNT_06229 286 AGAAACGCCAACAGAGCCATTTCAATGAAATAA 318
|||||||||||||||||||||||||||||||||
BSU40530___co 451 AGAAACGCCAACAGAGCCATTTCAATGAAATAA 483
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.