Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_06215 and BSU40450

See DNA alignment / Visit BSNT_06215 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:51
# Commandline: needle
#    -asequence pep-align/BSNT_06215___yycD.1.22522.seq
#    -bsequence pep-align/BSU40450___yycD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06215___yycD-BSU40450___yycD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06215___yycD-BSU40450___yycD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06215___yycD
# 2: BSU40450___yycD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 66
# Identity:      66/66 (100.0%)
# Similarity:    66/66 (100.0%)
# Gaps:           0/66 ( 0.0%)
# Score: 338.0
# 
#
#=======================================

BSNT_06215___      1 MIKKYAITPNVDADGWFIEVENVAPTALYTSKDAAIEKAKQVAKENSPSK     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40450___yy      1 MIKKYAITPNVDADGWFIEVENVAPTALYTSKDAAIEKAKQVAKENSPSK     50

BSNT_06215___     51 LVIYDQFKNVEEEHSF     66
                     ||||||||||||||||
BSU40450___yy     51 LVIYDQFKNVEEEHSF     66


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.