Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06215 and BSU40450
See
Amino acid alignment /
Visit
BSNT_06215 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:51
# Commandline: needle
# -asequence dna-align/BSNT_06215___yycD.1.22522.seq
# -bsequence dna-align/BSU40450___yycD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06215___yycD-BSU40450___yycD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06215___yycD-BSU40450___yycD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06215___yycD
# 2: BSU40450___yycD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 201
# Identity: 200/201 (99.5%)
# Similarity: 200/201 (99.5%)
# Gaps: 0/201 ( 0.0%)
# Score: 996.0
#
#
#=======================================
BSNT_06215___ 1 ATGATAAAGAAATATGCGATTACGCCTAATGTTGATGCGGACGGCTGGTT 50
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU40450___yy 1 ATGATAAAGAAATATGCGATTACACCTAATGTTGATGCGGACGGCTGGTT 50
BSNT_06215___ 51 TATTGAGGTGGAGAATGTAGCGCCGACAGCTTTGTATACGTCTAAAGACG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40450___yy 51 TATTGAGGTGGAGAATGTAGCGCCGACAGCTTTGTATACGTCTAAAGACG 100
BSNT_06215___ 101 CCGCTATTGAAAAGGCCAAACAGGTGGCTAAGGAAAACAGTCCGTCTAAG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40450___yy 101 CCGCTATTGAAAAGGCCAAACAGGTGGCTAAGGAAAACAGTCCGTCTAAG 150
BSNT_06215___ 151 CTTGTAATTTATGACCAGTTTAAAAATGTGGAAGAAGAACACTCATTTTA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40450___yy 151 CTTGTAATTTATGACCAGTTTAAAAATGTGGAAGAAGAACACTCATTTTA 200
BSNT_06215___ 201 A 201
|
BSU40450___yy 201 A 201
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.