Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_06177 and BSU40260

See DNA alignment / Visit BSNT_06177 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:47
# Commandline: needle
#    -asequence pep-align/BSNT_06177___yycQ.1.22522.seq
#    -bsequence pep-align/BSU40260___yycQ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06177___yycQ-BSU40260___yycQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06177___yycQ-BSU40260___yycQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06177___yycQ
# 2: BSU40260___yycQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 82
# Identity:      75/82 (91.5%)
# Similarity:    79/82 (96.3%)
# Gaps:           0/82 ( 0.0%)
# Score: 382.0
# 
#
#=======================================

BSNT_06177___      1 MGAIAVLFIVFGFPIIAGVFGIAGHFLFKRFWVAPLIVLIASLILLVTLA     50
                     |||||||||||||||:||||||||||||||||||||||||.|||||||||
BSU40260___yy      1 MGAIAVLFIVFGFPIVAGVFGIAGHFLFKRFWVAPLIVLITSLILLVTLA     50

BSNT_06177___     51 SGNSSFMFWVVIYTAIALVTSIVTLFLRKFFN     82
                     ||||||:||||:|||||||||:.||||||||.
BSU40260___yy     51 SGNSSFIFWVVMYTAIALVTSVATLFLRKFFE     82


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.