Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06177 and BSU40260

See Amino acid alignment / Visit BSNT_06177 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:47
# Commandline: needle
#    -asequence dna-align/BSNT_06177___yycQ.1.22522.seq
#    -bsequence dna-align/BSU40260___yycQ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06177___yycQ-BSU40260___yycQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06177___yycQ-BSU40260___yycQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06177___yycQ
# 2: BSU40260___yycQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity:     236/249 (94.8%)
# Similarity:   236/249 (94.8%)
# Gaps:           0/249 ( 0.0%)
# Score: 1128.0
# 
#
#=======================================

BSNT_06177___      1 ATGGGAGCCATCGCCGTTTTATTTATCGTTTTTGGTTTTCCGATCATCGC     50
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU40260___yy      1 ATGGGAGCCATCGCCGTTTTATTTATCGTTTTTGGTTTTCCGATCGTCGC     50

BSNT_06177___     51 AGGTGTATTTGGTATAGCGGGTCATTTTTTATTTAAGAGATTTTGGGTGG    100
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU40260___yy     51 AGGTGTATTTGGTATAGCGGGTCATTTTTTATTTAAAAGATTTTGGGTGG    100

BSNT_06177___    101 CACCGCTCATCGTCCTTATCGCGAGCTTGATATTGTTAGTTACGTTAGCT    150
                     |||||||||||||.||||||.|||||||||||||||||||||||||||||
BSU40260___yy    101 CACCGCTCATCGTTCTTATCACGAGCTTGATATTGTTAGTTACGTTAGCT    150

BSNT_06177___    151 TCGGGCAATAGCTCATTCATGTTTTGGGTTGTTATATATACGGCGATTGC    200
                     |||||.||||||||||||||.||||||||||||||.||||||||.|||||
BSU40260___yy    151 TCGGGGAATAGCTCATTCATATTTTGGGTTGTTATGTATACGGCAATTGC    200

BSNT_06177___    201 GTTAGTAACCAGTATTGTCACATTATTTCTCAGGAAATTTTTTAATTGA    249
                     |||||||||.|||.|||.|||||||||||||||||||||||||.|.|||
BSU40260___yy    201 GTTAGTAACGAGTGTTGCCACATTATTTCTCAGGAAATTTTTTGAGTGA    249


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