Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06175 and BSU40250

See DNA alignment / Visit BSNT_06175 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:46
# Commandline: needle
#    -asequence pep-align/BSNT_06175___yycR.1.22522.seq
#    -bsequence pep-align/BSU40250___yycR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06175___yycR-BSU40250___yycR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06175___yycR-BSU40250___yycR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06175___yycR
# 2: BSU40250___yycR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 408
# Identity:     407/408 (99.8%)
# Similarity:   408/408 (100.0%)
# Gaps:           0/408 ( 0.0%)
# Score: 2126.0
# 
#
#=======================================

BSNT_06175___      1 MGGMALTGNKAVVYKGKGTVAVEDIGYPELILRDGPGVPKANVNRKCEHG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40250___yy      1 MGGMALTGNKAVVYKGKGTVAVEDIGYPELILRDGPGVPKANVNRKCEHG     50

BSNT_06175___     51 VILKVITTNICGSDQHMVRGRTTAPEGLVLGHEITGEVIETGRDVEFIKK    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40250___yy     51 VILKVITTNICGSDQHMVRGRTTAPEGLVLGHEITGEVIETGRDVEFIKK    100

BSNT_06175___    101 GDIVSVPFNIACGRCVMCKTQKTHVCLNVNPDRPGSAYGYVDMGGWIGGQ    150
                     ||||||||||||||||||||||||||||||||||||||||||||||:|||
BSU40250___yy    101 GDIVSVPFNIACGRCVMCKTQKTHVCLNVNPDRPGSAYGYVDMGGWVGGQ    150

BSNT_06175___    151 SEYVMVPYADFQLLVFPDKEQALEKILDLTMLSDIFPTGFHGAYTAGVQT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40250___yy    151 SEYVMVPYADFQLLVFPDKEQALEKILDLTMLSDIFPTGFHGAYTAGVQT    200

BSNT_06175___    201 GSTVYIAGAGPVGLAAAHSAQLLGASTVIVGDLNEDRLAQARSFGCETVN    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40250___yy    201 GSTVYIAGAGPVGLAAAHSAQLLGASTVIVGDLNEDRLAQARSFGCETVN    250

BSNT_06175___    251 VQKHDRLGEQIEQILGEPTVDAAVDCVGFEASGHGNQGEAPAAVLNSIMD    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40250___yy    251 VQKHDRLGEQIEQILGEPTVDAAVDCVGFEASGHGNQGEAPAAVLNSIMD    300

BSNT_06175___    301 VTQVGGSLGIPGLYVTEDPGAKDADAKTGSLKIRFGLGWAKAHTFVTGQT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40250___yy    301 VTQVGGSLGIPGLYVTEDPGAKDADAKTGSLKIRFGLGWAKAHTFVTGQT    350

BSNT_06175___    351 PAMTYNRNLMKAILSGRAQIAKAVNATVISLDDAPKGYSDFDKGAAKKFV    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40250___yy    351 PAMTYNRNLMKAILSGRAQIAKAVNATVISLDDAPKGYSDFDKGAAKKFV    400

BSNT_06175___    401 IDPHGTLK    408
                     ||||||||
BSU40250___yy    401 IDPHGTLK    408


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