Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06172 and BSU40230

See DNA alignment / Visit BSNT_06172 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:46
# Commandline: needle
#    -asequence pep-align/BSNT_06172___yydA.1.22522.seq
#    -bsequence pep-align/BSU40230___yydA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06172___yydA-BSU40230___yydA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06172___yydA-BSU40230___yydA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06172___yydA
# 2: BSU40230___yydA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 159
# Identity:     158/159 (99.4%)
# Similarity:   158/159 (99.4%)
# Gaps:           0/159 ( 0.0%)
# Score: 790.0
# 
#
#=======================================

BSNT_06172___      1 MNINIVTIGKLKEKYLKQGIEEYTKRLSAYAKIDIIELPDEKAPENLSDQ     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40230___yy      1 MNINIVTIGKLKEKYLKQGIEEYTKRLSAYAKIDIIELPDEKAPENLSDQ     50

BSNT_06172___     51 DMKIIKDKEGDRILSKISPDAHVIALAIEGKMKTSEELADTIDKLATYGK    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40230___yy     51 DMKIIKDKEGDRILSKISPDAHVIALAIEGKMKTSEELADTIDKLATYGK    100

BSNT_06172___    101 SKVTFVIGGSLGLSDAVMKRADEKLSFSKMTFPHQLMRLILVEQIYRAFR    150
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU40230___yy    101 SKVTFVIGGSLGLSDTVMKRADEKLSFSKMTFPHQLMRLILVEQIYRAFR    150

BSNT_06172___    151 INRGEPYHK    159
                     |||||||||
BSU40230___yy    151 INRGEPYHK    159


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