Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06172 and BSU40230

See Amino acid alignment / Visit BSNT_06172 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:46
# Commandline: needle
#    -asequence dna-align/BSNT_06172___yydA.1.22522.seq
#    -bsequence dna-align/BSU40230___yydA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06172___yydA-BSU40230___yydA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06172___yydA-BSU40230___yydA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06172___yydA
# 2: BSU40230___yydA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 480
# Identity:     459/480 (95.6%)
# Similarity:   459/480 (95.6%)
# Gaps:           0/480 ( 0.0%)
# Score: 2211.0
# 
#
#=======================================

BSNT_06172___      1 GTGAATATCAATATTGTGACAATCGGAAAACTAAAAGAAAAATACCTCAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40230___yy      1 GTGAATATCAATATTGTGACAATCGGAAAACTAAAAGAAAAATACCTCAA     50

BSNT_06172___     51 ACAAGGCATTGAAGAATACACCAAACGACTTTCGGCCTACGCAAAAATCG    100
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU40230___yy     51 GCAAGGCATTGAAGAATACACCAAACGACTTTCGGCCTACGCAAAAATCG    100

BSNT_06172___    101 ACATCATCGAACTCCCGGACGAAAAAGCGCCGGAAAACCTAAGCGACCAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40230___yy    101 ACATCATCGAACTCCCGGACGAAAAAGCGCCGGAAAACCTAAGCGACCAG    150

BSNT_06172___    151 GACATGAAAATCATAAAAGACAAAGAAGGCGACCGCATCCTATCAAAAAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU40230___yy    151 GACATGAAAATCATAAAAGACAAAGAAGGCGACCGCATCCTATCCAAAAT    200

BSNT_06172___    201 CAGCCCCGACGCCCACGTCATCGCCCTCGCCATCGAAGGAAAAATGAAAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40230___yy    201 CAGCCCCGACGCCCACGTCATCGCCCTCGCCATCGAAGGAAAAATGAAAA    250

BSNT_06172___    251 CATCCGAAGAACTAGCCGATACAATAGATAAGCTGGCGACATATGGAAAA    300
                     |||||||||||||||||||||||||||||||||||||.||.|||||||||
BSU40230___yy    251 CATCCGAAGAACTAGCCGATACAATAGATAAGCTGGCTACTTATGGAAAA    300

BSNT_06172___    301 AGCAAAGTCACCTTCGTCATCGGCGGATCACTCGGATTGAGCGACGCGGT    350
                     |||||||||||||||||||||||||||||||||||||||||.|||.||||
BSU40230___yy    301 AGCAAAGTCACCTTCGTCATCGGCGGATCACTCGGATTGAGTGACACGGT    350

BSNT_06172___    351 AATGAAGCGAGCGGATGAGAAGCTGTCATTCTCGAAAATGACGTTCCCTC    400
                     .||||||||||||||.||||||||.||.||||||||.|||||.||.||||
BSU40230___yy    351 GATGAAGCGAGCGGACGAGAAGCTATCGTTCTCGAAGATGACATTTCCTC    400

BSNT_06172___    401 ATCAGTTGATGCGGCTCATACTAGTGGAGCAGATTTATCGGGCTTTTCGG    450
                     ||||||||||||||||.||..|||||||||||||||||||||||||||||
BSU40230___yy    401 ATCAGTTGATGCGGCTTATTTTAGTGGAGCAGATTTATCGGGCTTTTCGG    450

BSNT_06172___    451 ATTAATCGTGGGGAACCGTATCACAAATAG    480
                     ||||||||||||||.||.|||||.||.||.
BSU40230___yy    451 ATTAATCGTGGGGAGCCTTATCATAAGTAA    480


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