Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06172 and BSU40230
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:46
# Commandline: needle
# -asequence dna-align/BSNT_06172___yydA.1.22522.seq
# -bsequence dna-align/BSU40230___yydA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06172___yydA-BSU40230___yydA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06172___yydA-BSU40230___yydA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06172___yydA
# 2: BSU40230___yydA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 480
# Identity: 459/480 (95.6%)
# Similarity: 459/480 (95.6%)
# Gaps: 0/480 ( 0.0%)
# Score: 2211.0
#
#
#=======================================
BSNT_06172___ 1 GTGAATATCAATATTGTGACAATCGGAAAACTAAAAGAAAAATACCTCAA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40230___yy 1 GTGAATATCAATATTGTGACAATCGGAAAACTAAAAGAAAAATACCTCAA 50
BSNT_06172___ 51 ACAAGGCATTGAAGAATACACCAAACGACTTTCGGCCTACGCAAAAATCG 100
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU40230___yy 51 GCAAGGCATTGAAGAATACACCAAACGACTTTCGGCCTACGCAAAAATCG 100
BSNT_06172___ 101 ACATCATCGAACTCCCGGACGAAAAAGCGCCGGAAAACCTAAGCGACCAG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40230___yy 101 ACATCATCGAACTCCCGGACGAAAAAGCGCCGGAAAACCTAAGCGACCAG 150
BSNT_06172___ 151 GACATGAAAATCATAAAAGACAAAGAAGGCGACCGCATCCTATCAAAAAT 200
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU40230___yy 151 GACATGAAAATCATAAAAGACAAAGAAGGCGACCGCATCCTATCCAAAAT 200
BSNT_06172___ 201 CAGCCCCGACGCCCACGTCATCGCCCTCGCCATCGAAGGAAAAATGAAAA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40230___yy 201 CAGCCCCGACGCCCACGTCATCGCCCTCGCCATCGAAGGAAAAATGAAAA 250
BSNT_06172___ 251 CATCCGAAGAACTAGCCGATACAATAGATAAGCTGGCGACATATGGAAAA 300
|||||||||||||||||||||||||||||||||||||.||.|||||||||
BSU40230___yy 251 CATCCGAAGAACTAGCCGATACAATAGATAAGCTGGCTACTTATGGAAAA 300
BSNT_06172___ 301 AGCAAAGTCACCTTCGTCATCGGCGGATCACTCGGATTGAGCGACGCGGT 350
|||||||||||||||||||||||||||||||||||||||||.|||.||||
BSU40230___yy 301 AGCAAAGTCACCTTCGTCATCGGCGGATCACTCGGATTGAGTGACACGGT 350
BSNT_06172___ 351 AATGAAGCGAGCGGATGAGAAGCTGTCATTCTCGAAAATGACGTTCCCTC 400
.||||||||||||||.||||||||.||.||||||||.|||||.||.||||
BSU40230___yy 351 GATGAAGCGAGCGGACGAGAAGCTATCGTTCTCGAAGATGACATTTCCTC 400
BSNT_06172___ 401 ATCAGTTGATGCGGCTCATACTAGTGGAGCAGATTTATCGGGCTTTTCGG 450
||||||||||||||||.||..|||||||||||||||||||||||||||||
BSU40230___yy 401 ATCAGTTGATGCGGCTTATTTTAGTGGAGCAGATTTATCGGGCTTTTCGG 450
BSNT_06172___ 451 ATTAATCGTGGGGAACCGTATCACAAATAG 480
||||||||||||||.||.|||||.||.||.
BSU40230___yy 451 ATTAATCGTGGGGAGCCTTATCATAAGTAA 480
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