Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00904 and BSU39850
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:20
# Commandline: needle
# -asequence pep-align/BSNT_00904.1.22522.seq
# -bsequence pep-align/BSU39850___yxbF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00904-BSU39850___yxbF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00904-BSU39850___yxbF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00904
# 2: BSU39850___yxbF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity: 52/399 (13.0%)
# Similarity: 98/399 (24.6%)
# Gaps: 237/399 (59.4%)
# Score: 198.0
#
#
#=======================================
BSNT_00904 1 MSKVDRRITKSQEA-IKIALIELMTEKSFDHITIKEISERANVNRGTIYL 49
:.:|.|| :|.||:.|:.::...|||:|||:|:|.|:||::||
BSU39850___yx 1 -------MPESAEAQVKEALLALLKDRDIQHITMKEIAEKAKVSRGSLYL 43
BSNT_00904 50 HYLDKFDLLEKIMEEHINNMGD-FCESAAEMDWI-----ESTVH-CMEYL 92
:|.|||.::|.::|:....:|. ..::.:.||.: ..||| .:.::
BSU39850___yx 44 YYEDKFSIIEDVIEDMKEGLGKALFDAFSHMDTLHLNKKRQTVHPTLSFV 93
BSNT_00904 93 ESNYLFFSTMLASEGARYFRSQFLKFNIEEFRKD-------VDVTKGKNY 135
..:..|||.|:. |..|.:|..:.|::| |::|.
BSU39850___yx 94 HEHRSFFSVMMN-------RGHFHRFFKDVFQQDVLLAPIHVNLTP---- 132
BSNT_00904 136 GQSEDVIVEFIANAYVGVVEWWLKNEMPYPPRVMAEKVGELLERIL---- 181
...|:...:.|.....::.:||..:....|..:::||.||:.:..
BSU39850___yx 133 -IERDIYGHYRALYTYAIILYWLNEDAAASPEAISQKVWELVSQKRFYWL 181
BSNT_00904 181 -------------------------------------------------- 181
BSU39850___yx 182 FGKAVPGEREKEKQIDRRVVRTREALQKAFLDVLAEKQDYAGITISDITR 231
BSNT_00904 181 -------------------------------------------------- 181
BSU39850___yx 232 KSNIRRATFYDHYANKEELLQTMIQRSCAEIIDHLTIASSPNEFSLKEAE 281
BSNT_00904 181 -------------------------------------------------- 181
BSU39850___yx 282 KALAILLSALSNMPIVHFLNREWGVPHVIPDMFKALESFYLHQQTDIHAE 331
BSNT_00904 181 ------------------------------------------------- 181
BSU39850___yx 332 KKLYAHYVSAMIIGLLLYRLDEGKAHPPEVLAREFLQFLDVKKYKVVLL 380
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