Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00904 and BSU39850
See
Amino acid alignment /
Visit
BSNT_00904 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:20
# Commandline: needle
# -asequence dna-align/BSNT_00904.1.22522.seq
# -bsequence dna-align/BSU39850___yxbF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00904-BSU39850___yxbF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00904-BSU39850___yxbF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00904
# 2: BSU39850___yxbF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1205
# Identity: 360/1205 (29.9%)
# Similarity: 360/1205 (29.9%)
# Gaps: 721/1205 (59.8%)
# Score: 609.5
#
#
#=======================================
BSNT_00904 1 ATGTCCAAAGTG--GATAGAAGAATAACCAAAAGC-CAAGAGGCTATTAA 47
||| | ||||...|..|||| |||| |.|
BSU39850___yx 1 ---------GTGCCG------GAATCTGCCGAAGCTCAAG-------TGA 28
BSNT_00904 48 AATAGCTCTGATTGAGCTGATG-----ACTGAAA---AAAG-TTTTGATC 88
||.|| |.||||.|| |.||||| |.|| |.||.|.|
BSU39850___yx 29 AAGAG--------GCGCTGCTGGCTTTATTGAAAGATAGAGATATTCAAC 70
BSNT_00904 89 ATATTACGATTAAGGAAATTTCTGA-AAGGGCAAATGTAAACCGGGGAAC 137
|.||.||.||.||.|||||..|||| ||||.|||| ||.|.|||.|||.|
BSU39850___yx 71 ACATCACAATGAAAGAAATCGCTGAGAAGGCCAAA-GTGAGCCGCGGATC 119
BSNT_00904 138 AATCTATCTTCATTACTTA-GATAAATTT------------GATCTATTA 174
..||||.|||.|||| |.| |||||.||| |||.|..|.
BSU39850___yx 120 GCTCTACCTTTATTA-TGAGGATAAGTTTTCAATCATTGAGGATGTGATC 168
BSNT_00904 175 GAAAAAATTATGGAAG-----------------------------AG-CA 194
|||.|.||.|.||||| || ||
BSU39850___yx 169 GAAGACATGAAGGAAGGACTGGGCAAAGCGCTTTTTGACGCCTTCAGTCA 218
BSNT_00904 195 TAT-----------------------------AAAC-------------- 201
||| ||||
BSU39850___yx 219 TATGGATACCCTTCATTTGAACAAAAAACGGCAAACGGTGCATCCGACGC 268
BSNT_00904 202 --------------------------------------------AATATG 207
||.|..
BSU39850___yx 269 TGTCCTTTGTTCATGAGCATCGTTCCTTTTTTTCTGTGATGATGAACAGA 318
BSNT_00904 208 GGGGATTTT-----------------TGTGAGTCGGCAGCTGAAATGGAC 240
||..||||| ||||..||.|||| .|||..|
BSU39850___yx 319 GGACATTTTCATCGTTTTTTTAAGGATGTGTTTCAGCAG----GATGTGC 364
BSNT_00904 241 TG--------GAT-----TGAAT-------CGACTGTAC---AC-TGCAT 266
|| ||| ||||| |||.||.|| || |..||
BSU39850___yx 365 TGCTGGCTCCGATCCATGTGAATTTAACGCCGATTGAACGGGACATTTAT 414
BSNT_00904 267 GGA----AT---ACCTTG-AGA-GTA----ATTA---TTTATT--CTTTT 298
||| || .||||| |.| ||| |||| |.|||| ||...
BSU39850___yx 415 GGACATTATCGGGCCTTGTACACGTACGCGATTATCCTGTATTGGCTGAA 464
BSNT_00904 299 CGACGATG---------------------TTAGCCAGTGAAGGCGCTCGA 327
.||.|||| |.||||| |||||
BSU39850___yx 465 TGAGGATGCGGCCGCGTCTCCTGAAGCCATCAGCCA--GAAGG------- 505
BSNT_00904 328 TATTTTCGCAGTCAGTTCCTTAA-----GTTTAA-------TATCGAAGA 365
|.|.|.||...|||.||.|| ||||.| |.|.|||.|
BSU39850___yx 506 ---TATGGGAGCTTGTTTCTCAAAAGCGGTTTTATTGGCTGTTTGGAAAA 552
BSNT_00904 366 GTT----CAG------GAAAGATGTAGATGTAA--CGAAAGGCAAGAATT 403
|.| ||| ||.|||.|.|||.|.|| |||.||||..|...|
BSU39850___yx 553 GCTGTGCCAGGAGAGCGAGAGAAGGAGAAGCAAATCGACAGGCGGGTGGT 602
BSNT_00904 404 ACG---GCCAAAG----TGAAGATGTCATTGTTGAATTTAT------AGC 440
.|| |..|.|| ||.|||.|.||||..||.||.||| ||.
BSU39850___yx 603 TCGAACGAGAGAGGCGCTGCAGAAGGCATTTCTGGATGTATTGGCGGAGA 652
BSNT_00904 441 AA-ATGCTTACGTAGGGGTAGTGGAATGGTGGTT----AAAAAACG---A 482
|| |.|..|||| ..||.||...|.|| |.|..||| |
BSU39850___yx 653 AACAAGACTACG--------CGGGCATCACGATTTCAGATATTACGCGTA 694
BSNT_00904 483 AATGCCTTATCCGCCTCGTG-------------TC---ATGGCAGAAAAA 516
||.||..||||||| |||| || |||.||..||
BSU39850___yx 695 AAAGCAATATCCGC--CGTGCAACCTTTTATGATCACTATGCCAATAA-- 740
BSNT_00904 517 GTGGGGGAGTT----------AT--TAGAGCG------------GAT--T 540
||.|||.|| || ||.|||| ||| |
BSU39850___yx 741 --GGAGGAATTGCTCCAAACCATGATACAGCGATCATGTGCGGAGATCAT 788
BSNT_00904 541 TTATAA-------------------------------------------- 546
|.||.|
BSU39850___yx 789 TGATCACCTGACGATTGCCTCCAGCCCGAATGAATTTTCCTTAAAGGAAG 838
BSNT_00904 546 -------------------------------------------------- 546
BSU39850___yx 839 CGGAGAAGGCGCTCGCCATTCTGCTTTCTGCTTTGTCAAACATGCCCATT 888
BSNT_00904 546 -------------------------------------------------- 546
BSU39850___yx 889 GTCCATTTTCTCAATCGGGAATGGGGTGTTCCTCATGTGATACCTGATAT 938
BSNT_00904 546 -------------------------------------------------- 546
BSU39850___yx 939 GTTCAAAGCGCTGGAATCGTTTTATCTGCATCAGCAAACTGATATTCACG 988
BSNT_00904 546 -------------------------------------------------- 546
BSU39850___yx 989 CAGAGAAAAAGCTTTATGCCCATTATGTATCCGCAATGATTATCGGGTTG 1038
BSNT_00904 546 -------------------------------------------------- 546
BSU39850___yx 1039 CTTTTGTATCGGCTGGATGAAGGAAAGGCGCATCCGCCTGAAGTGCTGGC 1088
BSNT_00904 546 -------------------------------------------------- 546
BSU39850___yx 1089 GAGGGAGTTTTTGCAGTTTTTGGATGTGAAGAAATATAAGGTTGTATTGC 1138
BSNT_00904 546 ----- 546
BSU39850___yx 1139 TTTAA 1143
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.