Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05990 and BSU39139
See
DNA alignment /
Visit
BSNT_05990 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:23
# Commandline: needle
# -asequence pep-align/BSNT_05990.1.22522.seq
# -bsequence pep-align/BSU39139___yxzJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05990-BSU39139___yxzJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05990-BSU39139___yxzJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05990
# 2: BSU39139___yxzJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 116
# Identity: 41/116 (35.3%)
# Similarity: 42/116 (36.2%)
# Gaps: 73/116 (62.9%)
# Score: 223.0
#
#
#=======================================
BSNT_05990 1 MNITQYEKLKKHLSDADTGPFTLNEFSFYMKEDDRYIHIPVFELKLSAQT 50
||||||||||:||||.|||||||||||||||||||||||||||
BSU39139___yx 1 MNITQYEKLKQHLSDEDTGPFTLNEFSFYMKEDDRYIHIPVFE------- 43
BSNT_05990 51 CDIHLRFEDVSASKLDDLESIDSVALEIVPTDDQWERLRYYVYDEENQIS 100
BSU39139___yx 43 -------------------------------------------------- 43
BSNT_05990 101 FYCGGWDVIKCDKKSH 116
BSU39139___yx 43 ---------------- 43
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.