Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05990 and BSU39139
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:23
# Commandline: needle
# -asequence dna-align/BSNT_05990.1.22522.seq
# -bsequence dna-align/BSU39139___yxzJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05990-BSU39139___yxzJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05990-BSU39139___yxzJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05990
# 2: BSU39139___yxzJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 351
# Identity: 127/351 (36.2%)
# Similarity: 127/351 (36.2%)
# Gaps: 219/351 (62.4%)
# Score: 615.0
#
#
#=======================================
BSNT_05990 1 TTGAATATCACACAATACGAGAAATTGAAAAAGCATCTTTCTGATGCGGA 50
||||||||||||||||||||||||||||||.|||||||||||||||.|||
BSU39139___yx 1 TTGAATATCACACAATACGAGAAATTGAAACAGCATCTTTCTGATGAGGA 50
BSNT_05990 51 TACAGGTCCATTTACATTAAACGAGTTTTCGTTCTATATGAAAGAAGATG 100
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU39139___yx 51 TACAGGTCCATTTACATTAAACGAGTTTTCTTTCTATATGAAAGAAGATG 100
BSNT_05990 101 ATCGTTATATACATATTCCTGTGTTTGAATTAAAACTATCAGCTCAAACC 150
||||||||||.|||||||||||||||||||.|
BSU39139___yx 101 ATCGTTATATTCATATTCCTGTGTTTGAATGA------------------ 132
BSNT_05990 151 TGTGACATTCATTTACGGTTTGAAGACGTTAGTGCATCAAAGCTGGATGA 200
BSU39139___yx 132 -------------------------------------------------- 132
BSNT_05990 201 TCTTGAATCCATCGATTCTGTTGCATTGGAGATTGTACCGACTGACGATC 250
BSU39139___yx 132 -------------------------------------------------- 132
BSNT_05990 251 AATGGGAAAGACTCCGTTATTATGTGTATGACGAAGAAAACCAAATAAGC 300
BSU39139___yx 132 -------------------------------------------------- 132
BSNT_05990 301 TTCTATTGCGGAGGTTGGGATGTGATCAAGTGTGACAAGAAGTCACACTA 350
BSU39139___yx 132 -------------------------------------------------- 132
BSNT_05990 351 A 351
BSU39139___yx 132 - 132
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