Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05879 and BSU38440

See DNA alignment / Visit BSNT_05879 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:10
# Commandline: needle
#    -asequence pep-align/BSNT_05879___ywaF.1.22522.seq
#    -bsequence pep-align/BSU38440___ywaF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05879___ywaF-BSU38440___ywaF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05879___ywaF-BSU38440___ywaF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05879___ywaF
# 2: BSU38440___ywaF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 237
# Identity:     230/237 (97.0%)
# Similarity:   232/237 (97.9%)
# Gaps:           0/237 ( 0.0%)
# Score: 1179.0
# 
#
#=======================================

BSNT_05879___      1 MQKYVQSDYKHDPFHLFSTEHVVTLAIIALLAILLFLFQDGVKQPRASRF     50
                     ||||||||||||||||||||||||||||:|||||||||||.|||||||||
BSU38440___yw      1 MQKYVQSDYKHDPFHLFSTEHVVTLAIISLLAILLFLFQDEVKQPRASRF     50

BSNT_05879___     51 LRSLFVFLLLGSQIGYQIWMVATGRWSVRTSLPLQLSDLSVYLSAIMLVT    100
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU38440___yw     51 LRSLFVFLLLGSQIGYQIWMVATDRWSVRTSLPLQLSDLSVYLSAIMLVT    100

BSNT_05879___    101 KSRKLFVFLFFAGIGSSIQALATPDLGMFSFPHIRYILFFISHGSVFLSC    150
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU38440___yw    101 KSRKLFVFLFFVGIGSSIQALATPDLGMFSFPHIRYILFFISHGSVFLSC    150

BSNT_05879___    151 LLMAVIGTNRMGQRSLWVTVLLVNVYGVCIFLIDRWLGANYMYLTKKPGG    200
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU38440___yw    151 LLMAVIGTYRMGQRSLWVTVLLVNVYGVCIFLIDRWLGANYMYLTKKPGG    200

BSNT_05879___    201 SSLLDVLGPWPWYIVSAEAITVASFFILYMLYRIFKK    237
                     |||||||||||||||||||||:|||||||.|||||||
BSU38440___yw    201 SSLLDVLGPWPWYIVSAEAITIASFFILYWLYRIFKK    237


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