Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05879 and BSU38440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:10
# Commandline: needle
# -asequence dna-align/BSNT_05879___ywaF.1.22522.seq
# -bsequence dna-align/BSU38440___ywaF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05879___ywaF-BSU38440___ywaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05879___ywaF-BSU38440___ywaF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05879___ywaF
# 2: BSU38440___ywaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 714
# Identity: 699/714 (97.9%)
# Similarity: 699/714 (97.9%)
# Gaps: 0/714 ( 0.0%)
# Score: 3435.0
#
#
#=======================================
BSNT_05879___ 1 TTGCAAAAATATGTTCAATCCGACTATAAGCATGATCCGTTTCATCTGTT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38440___yw 1 TTGCAAAAATATGTTCAATCCGACTATAAGCATGATCCGTTTCATCTGTT 50
BSNT_05879___ 51 TTCGACAGAGCACGTAGTGACGTTAGCGATTATCGCCCTTTTGGCCATTC 100
||||||||||||.|||||||||||||||||||||.|||||||||||||||
BSU38440___yw 51 TTCGACAGAGCATGTAGTGACGTTAGCGATTATCTCCCTTTTGGCCATTC 100
BSNT_05879___ 101 TGTTGTTTTTGTTCCAAGATGGGGTCAAGCAGCCGAGGGCCAGCCGGTTT 150
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU38440___yw 101 TGTTGTTTTTGTTCCAAGATGAGGTCAAGCAGCCGAGGGCCAGCCGGTTT 150
BSNT_05879___ 151 TTGCGTTCTCTGTTTGTGTTTCTTTTGCTTGGTTCGCAAATCGGCTATCA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38440___yw 151 TTGCGTTCTCTGTTTGTGTTTCTTTTGCTTGGTTCGCAAATCGGCTATCA 200
BSNT_05879___ 201 AATATGGATGGTCGCCACGGGCAGGTGGTCGGTGCGCACTTCATTGCCTC 250
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU38440___yw 201 AATATGGATGGTCGCCACGGACAGGTGGTCGGTGCGCACTTCATTGCCTC 250
BSNT_05879___ 251 TCCAGCTTAGTGACCTGTCGGTGTATTTGTCAGCTATTATGTTAGTGACA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38440___yw 251 TCCAGCTTAGTGACCTGTCGGTGTATTTGTCAGCTATTATGTTAGTGACA 300
BSNT_05879___ 301 AAAAGCAGAAAGCTGTTTGTGTTTTTGTTTTTTGCCGGCATCGGCAGTTC 350
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU38440___yw 301 AAAAGCAGAAAGCTGTTTGTGTTTTTGTTTTTTGTCGGCATCGGCAGTTC 350
BSNT_05879___ 351 GATTCAGGCTCTTGCCACTCCTGACCTCGGAATGTTTTCATTTCCGCATA 400
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU38440___yw 351 GATTCAGGCTCTTGCCACTCCTGACCTCGGTATGTTTTCATTTCCGCATA 400
BSNT_05879___ 401 TCCGATATATCCTCTTTTTTATTTCTCACGGGTCTGTGTTTTTATCCTGT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38440___yw 401 TCCGATATATCCTCTTTTTTATTTCTCACGGGTCTGTGTTTTTATCCTGT 450
BSNT_05879___ 451 CTGCTGATGGCTGTGATTGGCACCAACAGAATGGGCCAGCGCTCGTTATG 500
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU38440___yw 451 CTGCTGATGGCTGTGATTGGCACCTACAGAATGGGCCAGCGCTCGTTATG 500
BSNT_05879___ 501 GGTGACAGTCCTGCTTGTTAATGTGTACGGCGTCTGTATTTTCCTGATTG 550
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU38440___yw 501 GGTGACAGTCCTGCTTGTTAATGTGTACGGCGTCTGTATTTTTCTGATTG 550
BSNT_05879___ 551 ATCGCTGGCTTGGCGCGAATTATATGTATTTGACGAAAAAACCGGGCGGA 600
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU38440___yw 551 ATCGCTGGCTTGGCGCGAATTATATGTATTTGACGAAAAAACCGGGCGGT 600
BSNT_05879___ 601 TCCTCTCTCTTAGATGTTCTCGGGCCATGGCCATGGTATATCGTCTCGGC 650
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU38440___yw 601 TCCTCTCTCTTAGATGTTCTCGGGCCATGGCCGTGGTATATCGTCTCGGC 650
BSNT_05879___ 651 TGAAGCCATCACGGTCGCCAGCTTTTTCATTCTTTATATGCTTTATCGCA 700
||||||||||||..||||.||||||||||||||||||..|||||||||||
BSU38440___yw 651 TGAAGCCATCACAATCGCAAGCTTTTTCATTCTTTATTGGCTTTATCGCA 700
BSNT_05879___ 701 TCTTCAAAAAATGA 714
||||||||||||||
BSU38440___yw 701 TCTTCAAAAAATGA 714
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