Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05868 and BSU38390

See DNA alignment / Visit BSNT_05868 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:09
# Commandline: needle
#    -asequence pep-align/BSNT_05868___ywbA.1.22522.seq
#    -bsequence pep-align/BSU38390___ywbA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05868___ywbA-BSU38390___ywbA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05868___ywbA-BSU38390___ywbA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05868___ywbA
# 2: BSU38390___ywbA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity:     436/444 (98.2%)
# Similarity:   436/444 (98.2%)
# Gaps:           4/444 ( 0.9%)
# Score: 2214.0
# 
#
#=======================================

BSNT_05868___      1 MSAFTRVMEEKIMPVAGKIAGQRHLSALRDGIILTMPLIIIGSVFLILTS     50
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU38390___yw      1 MSTFTRVMEEKIMPVAGKIAGQRHLSALRDGIILTMPLIIIGSVFLILTS     50

BSNT_05868___     51 LPIPGYADFMASVFGNEWADKLGYPVNASFDIMAMIAAFGIAYRLAESYG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38390___yw     51 LPIPGYADFMASVFGNEWADKLGYPVNASFDIMAMIAAFGIAYRLAESYG    100

BSNT_05868___    101 VDALSAGAISIAAFLLATPFEVPFTPHGSTEPIMVGGGIPITLLGSKGLF    150
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU38390___yw    101 VDALSAGAISIAAFLLATPFEVPFTPHGSTESIMVGGGIPITLLGSKGLF    150

BSNT_05868___    151 VAMLIALFSTEIYRYIIQKNIVFKMPDGVPPAVSKSFVALIPGFIIVFLV    200
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU38390___yw    151 VAMLIALFSTEIYRYIIQKNIVFKMPDGVPPAVSKSFVALIPGFIIVLLV    200

BSNT_05868___    201 WLARLLIEMTPFQSLHNVVGDLLGTPLSILGGSLGGSLIAEFVQMLLWSC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38390___yw    201 WLARLLIEMTPFQSLHNVVGDLLGTPLSILGGSLGGSLIAEFVQMLLWSC    250

BSNT_05868___    251 GIHGASIIGGIMAPIWYGAMDANRLAFQAGEALPSIFTTQFFQIWINVGG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38390___yw    251 GIHGASIIGGIMAPIWYGAMDANRLAFQAGEALPSIFTTQFFQIWINVGG    300

BSNT_05868___    301 SGATLALVLTMLVRSRSKQMKQLGRLGIGPALFNINEPIIFGMPIVMNPL    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38390___yw    301 SGATLALVLTMLVRSRSKQMKQLGRLGIGPALFNINEPIIFGMPIVMNPL    350

BSNT_05868___    351 LIVPFIIAPLLTITATYIGMSTGLVARPAGIAVPWTMPPLISGYLATGGK    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38390___yw    351 LIVPFIIAPLLTITATYIGMSTGLVARPAGIAVPWTMPPLISGYLATGGK    400

BSNT_05868___    401 VSGAVMQLVNLLITCAIYYPFFRIWDHQKWREESAVESGG----    440
                     |||||||||||||||||||||||||||||||||||||||.    
BSU38390___yw    401 VSGAVMQLVNLLITCAIYYPFFRIWDHQKWREESAVESGDKNVM    444


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