Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05868 and BSU38390
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:09
# Commandline: needle
# -asequence dna-align/BSNT_05868___ywbA.1.22522.seq
# -bsequence dna-align/BSU38390___ywbA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05868___ywbA-BSU38390___ywbA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05868___ywbA-BSU38390___ywbA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05868___ywbA
# 2: BSU38390___ywbA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1336
# Identity: 1300/1336 (97.3%)
# Similarity: 1300/1336 (97.3%)
# Gaps: 14/1336 ( 1.0%)
# Score: 6402.0
#
#
#=======================================
BSNT_05868___ 1 ATGAGCGCATTCACTCGGGTGATGGAGGAAAAAATAATGCCTGTCGCCGG 50
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU38390___yw 1 ATGAGCACATTCACTCGGGTGATGGAGGAAAAAATAATGCCTGTCGCCGG 50
BSNT_05868___ 51 GAAAATTGCCGGGCAGCGGCATCTCAGCGCTTTGCGTGACGGAATTATCC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38390___yw 51 GAAAATTGCCGGGCAGCGGCATCTCAGCGCTTTGCGTGACGGAATTATCC 100
BSNT_05868___ 101 TGACCATGCCGCTGATTATTATCGGGTCTGTCTTCTTGATTTTAACGAGC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38390___yw 101 TGACCATGCCGCTGATTATTATCGGGTCTGTCTTCTTGATTTTAACGAGC 150
BSNT_05868___ 151 CTGCCGATTCCGGGGTATGCTGATTTCATGGCGAGTGTGTTTGGGAACGA 200
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU38390___yw 151 TTGCCGATTCCGGGGTATGCTGATTTCATGGCGAGTGTGTTTGGGAACGA 200
BSNT_05868___ 201 GTGGGCCGATAAGCTCGGATATCCTGTTAACGCTTCGTTTGATATTATGG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38390___yw 201 GTGGGCCGATAAGCTCGGATATCCTGTTAACGCTTCGTTTGATATTATGG 250
BSNT_05868___ 251 CGATGATTGCCGCTTTTGGGATCGCCTATCGGCTGGCGGAAAGCTATGGT 300
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU38390___yw 251 CGATGATTGCCGCTTTTGGGATCGCCTATCGGCTGGCAGAAAGCTATGGT 300
BSNT_05868___ 301 GTCGATGCCCTTTCTGCCGGAGCGATTTCAATTGCCGCATTTCTGCTGGC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38390___yw 301 GTCGATGCCCTTTCTGCCGGAGCGATTTCAATTGCCGCATTTCTGCTGGC 350
BSNT_05868___ 351 AACGCCGTTTGAGGTGCCGTTTACACCGCATGGCTCAACGGAACCCATCA 400
|||.||||||||||||||||||||||||||||||||||||||..||||||
BSU38390___yw 351 AACACCGTTTGAGGTGCCGTTTACACCGCATGGCTCAACGGAGTCCATCA 400
BSNT_05868___ 401 TGGTAGGGGGCGGAATCCCGATCACGCTGCTTGGCAGCAAGGGCTTATTT 450
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU38390___yw 401 TGGTAGGGGGCGGAATCCCGATCACGCTGCTCGGCAGCAAGGGCTTATTT 450
BSNT_05868___ 451 GTCGCCATGCTGATCGCCTTGTTTTCAACCGAAATCTATCGGTACATTAT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38390___yw 451 GTCGCCATGCTGATCGCCTTGTTTTCAACCGAAATCTATCGGTACATTAT 500
BSNT_05868___ 501 TCAAAAAAATATCGTCTTCAAAATGCCAGACGGTGTGCCGCCTGCGGTAA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38390___yw 501 TCAAAAAAATATCGTCTTCAAAATGCCAGACGGTGTGCCGCCTGCGGTAA 550
BSNT_05868___ 551 GCAAATCGTTTGTCGCGCTGATTCCCGGCTTTATCATTGTGTTTCTCGTG 600
|||||||.|||||||||||||||||||||||||||||||||.|||||||.
BSU38390___yw 551 GCAAATCATTTGTCGCGCTGATTCCCGGCTTTATCATTGTGCTTCTCGTA 600
BSNT_05868___ 601 TGGCTGGCGCGCCTTCTGATTGAAATGACACCTTTTCAGAGTCTGCACAA 650
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU38390___yw 601 TGGCTGGCGCGTCTTCTGATTGAAATGACACCTTTTCAGAGTCTGCACAA 650
BSNT_05868___ 651 TGTCGTAGGAGACCTGCTTGGCACACCGCTTTCCATCCTAGGCGGCAGTC 700
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU38390___yw 651 TGTCGTAGGAGACCTGCTTGGCACACCGCTTTCCATCCTTGGCGGCAGTC 700
BSNT_05868___ 701 TCGGCGGAAGCCTGATCGCTGAATTTGTGCAGATGCTGCTTTGGTCGTGC 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38390___yw 701 TCGGCGGAAGCCTGATCGCTGAATTTGTGCAGATGCTGCTTTGGTCGTGC 750
BSNT_05868___ 751 GGGATTCACGGGGCTTCCATCATTGGCGGAATCATGGCGCCGATTTGGTA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38390___yw 751 GGGATTCACGGGGCTTCCATCATTGGCGGAATCATGGCGCCGATTTGGTA 800
BSNT_05868___ 801 CGGCGCGATGGATGCCAACCGTCTCGCCTTCCAAGCGGGCGAGGCGCTGC 850
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU38390___yw 801 CGGCGCGATGGATGCCAACCGTCTCGCCTTCCAAGCAGGCGAGGCGCTGC 850
BSNT_05868___ 851 CGAGTATTTTTACGACTCAGTTCTTTCAAATTTGGATCAATGTCGGCGGG 900
||||||||||||||||||||||.||||||||||||||||||||||||||.
BSU38390___yw 851 CGAGTATTTTTACGACTCAGTTTTTTCAAATTTGGATCAATGTCGGCGGA 900
BSNT_05868___ 901 AGCGGGGCGACGCTGGCGCTTGTCCTGACGATGCTTGTGCGCTCCCGGAG 950
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU38390___yw 901 AGCGGGGCGACGCTGGCGCTTGTCCTGACGATGCTTGTGCGCTCCCGCAG 950
BSNT_05868___ 951 TAAACAAATGAAGCAGCTTGGACGATTAGGAATCGGCCCTGCGCTATTTA 1000
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU38390___yw 951 CAAACAAATGAAGCAGCTTGGACGATTAGGAATCGGCCCTGCGCTATTTA 1000
BSNT_05868___ 1001 ATATCAACGAGCCGATCATTTTCGGCATGCCGATTGTCATGAATCCGCTC 1050
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU38390___yw 1001 ATATCAACGAGCCGATCATTTTCGGCATGCCGATTGTCATGAATCCCCTC 1050
BSNT_05868___ 1051 CTTATTGTCCCATTTATCATCGCACCGCTCCTCACGATTACCGCGACTTA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38390___yw 1051 CTTATTGTCCCATTTATCATCGCACCGCTCCTCACGATTACCGCGACTTA 1100
BSNT_05868___ 1101 TATCGGCATGAGCACCGGGCTGGTGGCAAGACCGGCCGGAATCGCGGTGC 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38390___yw 1101 TATCGGCATGAGCACCGGGCTGGTGGCAAGACCGGCCGGAATCGCGGTGC 1150
BSNT_05868___ 1151 CGTGGACGATGCCGCCGCTCATATCAGGCTACCTGGCGACAGGCGGAAAG 1200
|.||||||||||||||||||||||||||.|||||||||||||||||||||
BSU38390___yw 1151 CATGGACGATGCCGCCGCTCATATCAGGTTACCTGGCGACAGGCGGAAAG 1200
BSNT_05868___ 1201 GTGTCGGGCGCCGTTATGCAGCTGGTAAACCTGCTGATCACCTGTGCTAT 1250
|||||||||||.|||||||||||||||||.||||||||||||||||||||
BSU38390___yw 1201 GTGTCGGGCGCAGTTATGCAGCTGGTAAATCTGCTGATCACCTGTGCTAT 1250
BSNT_05868___ 1251 CTACTATCCGTTTTTCAGAATATGGGATCATCAAAAATGGCGGGAAGAGA 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38390___yw 1251 CTACTATCCGTTTTTCAGAATATGGGATCATCAAAAATGGCGGGAAGAGA 1300
BSNT_05868___ 1301 GTGCGGTTGAATCTGGCGGATAA------------- 1323
|||||||||||||||| ||||||
BSU38390___yw 1301 GTGCGGTTGAATCTGG-GGATAAAAATGTGATGTGA 1335
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