Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05816 and BSU38030

See DNA alignment / Visit BSNT_05816 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:02
# Commandline: needle
#    -asequence pep-align/BSNT_05816___ywdA.1.22522.seq
#    -bsequence pep-align/BSU38030___ywdA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05816___ywdA-BSU38030___ywdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05816___ywdA-BSU38030___ywdA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05816___ywdA
# 2: BSU38030___ywdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 82
# Identity:      82/82 (100.0%)
# Similarity:    82/82 (100.0%)
# Gaps:           0/82 ( 0.0%)
# Score: 414.0
# 
#
#=======================================

BSNT_05816___      1 MNIHEQKITPECLEKAANQVEDKREEYKDVLLQLKKMLGGTTPHSETAEI     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38030___yw      1 MNIHEQKITPECLEKAANQVEDKREEYKDVLLQLKKMLGGTTPHSETAEI     50

BSNT_05816___     51 LTRAYEQMKEYALFVQSIETFLRKSANNLKIK     82
                     ||||||||||||||||||||||||||||||||
BSU38030___yw     51 LTRAYEQMKEYALFVQSIETFLRKSANNLKIK     82


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.