Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05816 and BSU38030

See Amino acid alignment / Visit BSNT_05816 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:02
# Commandline: needle
#    -asequence dna-align/BSNT_05816___ywdA.1.22522.seq
#    -bsequence dna-align/BSU38030___ywdA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05816___ywdA-BSU38030___ywdA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05816___ywdA-BSU38030___ywdA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05816___ywdA
# 2: BSU38030___ywdA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity:     247/249 (99.2%)
# Similarity:   247/249 (99.2%)
# Gaps:           0/249 ( 0.0%)
# Score: 1227.0
# 
#
#=======================================

BSNT_05816___      1 TTGAATATACATGAACAGAAGATAACACCGGAATGTTTGGAAAAGGCTGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38030___yw      1 TTGAATATACATGAACAGAAGATAACACCGGAATGTTTGGAAAAGGCTGC     50

BSNT_05816___     51 TAACCAAGTTGAAGATAAGCGGGAAGAATATAAGGATGTGCTGCTTCAGC    100
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU38030___yw     51 TAACCAAGTTGAAGATAAGCGAGAAGAATATAAGGATGTGCTGCTTCAGC    100

BSNT_05816___    101 TGAAAAAAATGCTTGGCGGAACAACGCCGCACAGTGAAACGGCGGAAATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38030___yw    101 TGAAAAAAATGCTTGGCGGAACAACGCCGCACAGTGAAACGGCGGAAATT    150

BSNT_05816___    151 CTCACGCGGGCATATGAACAAATGAAGGAATATGCACTTTTTGTTCAGTC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38030___yw    151 CTCACGCGGGCATATGAACAAATGAAGGAATATGCACTTTTTGTTCAGTC    200

BSNT_05816___    201 GATAGAAACATTTTTGAGGAAATCTGCAAACAATTTAAAAATTAAATAA    249
                     ||||||||||||||||||||||||||||||||||||||||||.||||||
BSU38030___yw    201 GATAGAAACATTTTTGAGGAAATCTGCAAACAATTTAAAAATCAAATAA    249


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