Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_05643 and BSU36940

See DNA alignment / Visit BSNT_05643 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:40
# Commandline: needle
#    -asequence pep-align/BSNT_05643___ywlD.1.22522.seq
#    -bsequence pep-align/BSU36940___ywlD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05643___ywlD-BSU36940___ywlD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05643___ywlD-BSU36940___ywlD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05643___ywlD
# 2: BSU36940___ywlD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity:     184/185 (99.5%)
# Similarity:   184/185 (99.5%)
# Gaps:           0/185 ( 0.0%)
# Score: 910.0
# 
#
#=======================================

BSNT_05643___      1 MSDLFIGELITLSIMAFALGMDAFSVGLGMGMVKLRKKQIFYIGFIIGLF     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36940___yw      1 MSDLFIGELITLSIMAFALGMDAFSVGLGMGMVKLRKKQIFYIGFIIGLF     50

BSNT_05643___     51 HVIMPLAGMAAGNMLSGLLGVLAVYIGGALLFVLGVQMLMASFKQSEERF    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36940___yw     51 HVIMPLAGMAAGNMLSGLLGVLAVYIGGALLFVLGVQMLMASFKQSEERF    100

BSNT_05643___    101 MSPAGPGLLLFAIGVSLDSFSVGLSLGIYGSHPFLTITLFGLFSMMLTWL    150
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU36940___yw    101 MSPAGPGLLLFAIGVSLDSFSVGLSLGIYGSHPLLTITLFGLFSMMLTWL    150

BSNT_05643___    151 GLLVGKQVQSWLGTYSEALGGIILIVFGLKLLLPI    185
                     |||||||||||||||||||||||||||||||||||
BSU36940___yw    151 GLLVGKQVQSWLGTYSEALGGIILIVFGLKLLLPI    185


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.