Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05643 and BSU36940

See Amino acid alignment / Visit BSNT_05643 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:41
# Commandline: needle
#    -asequence dna-align/BSNT_05643___ywlD.1.22522.seq
#    -bsequence dna-align/BSU36940___ywlD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05643___ywlD-BSU36940___ywlD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05643___ywlD-BSU36940___ywlD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05643___ywlD
# 2: BSU36940___ywlD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 558
# Identity:     554/558 (99.3%)
# Similarity:   554/558 (99.3%)
# Gaps:           0/558 ( 0.0%)
# Score: 2754.0
# 
#
#=======================================

BSNT_05643___      1 ATGTCGGATTTGTTTATAGGCGAACTGATTACATTAAGCATCATGGCGTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36940___yw      1 ATGTCGGATTTGTTTATAGGCGAACTGATTACATTAAGCATCATGGCGTT     50

BSNT_05643___     51 TGCTTTAGGGATGGATGCTTTTTCTGTAGGCCTTGGAATGGGCATGGTCA    100
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU36940___yw     51 TGCTTTAGGGATGGATGCTTTTTCTGTCGGCCTTGGAATGGGCATGGTCA    100

BSNT_05643___    101 AACTTAGAAAGAAGCAGATATTCTATATTGGTTTCATCATCGGCCTCTTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36940___yw    101 AACTTAGAAAGAAGCAGATATTCTATATTGGTTTCATCATCGGCCTCTTT    150

BSNT_05643___    151 CACGTCATCATGCCTCTCGCAGGGATGGCGGCCGGTAACATGCTGTCAGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36940___yw    151 CACGTCATCATGCCTCTCGCAGGGATGGCGGCCGGTAACATGCTGTCAGG    200

BSNT_05643___    201 GCTCCTCGGCGTGTTAGCGGTTTATATCGGTGGGGCGCTGCTTTTTGTTC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36940___yw    201 GCTCCTCGGCGTGTTAGCGGTTTATATCGGTGGGGCGCTGCTTTTTGTTC    250

BSNT_05643___    251 TTGGGGTTCAAATGCTTATGGCCTCTTTTAAACAGTCAGAAGAACGATTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36940___yw    251 TTGGGGTTCAAATGCTTATGGCCTCTTTTAAACAGTCAGAAGAACGATTC    300

BSNT_05643___    301 ATGTCACCGGCAGGGCCGGGCTTATTGCTGTTTGCCATCGGCGTCAGCCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36940___yw    301 ATGTCACCGGCAGGGCCGGGCTTATTGCTGTTTGCCATCGGCGTCAGCCT    350

BSNT_05643___    351 TGACAGCTTTTCCGTCGGCTTGAGCTTGGGGATATACGGCTCGCATCCGT    400
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU36940___yw    351 TGACAGCTTTTCCGTCGGCTTGAGCTTGGGGATATACGGCTCGCATCCGC    400

BSNT_05643___    401 TCCTCACAATTACCCTGTTCGGGCTGTTTAGCATGATGTTGACATGGCTG    450
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU36940___yw    401 TCCTCACAATTACCCTGTTCGGGCTGTTCAGCATGATGTTGACATGGCTG    450

BSNT_05643___    451 GGCCTGCTGGTCGGAAAACAAGTGCAGTCATGGCTTGGCACATACAGCGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36940___yw    451 GGCCTGCTGGTCGGAAAACAAGTGCAGTCATGGCTTGGCACATACAGCGA    500

BSNT_05643___    501 AGCGCTCGGGGGCATCATATTAATCGTGTTTGGACTAAAGCTGCTTTTGC    550
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU36940___yw    501 AGCGCTCGGGGGCATCATATTAATCGTGTTTGGATTAAAGCTGCTTTTGC    550

BSNT_05643___    551 CAATTTAA    558
                     ||||||||
BSU36940___yw    551 CAATTTAA    558


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