Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05552 and BSU36350

See DNA alignment / Visit BSNT_05552 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:31
# Commandline: needle
#    -asequence pep-align/BSNT_05552___ywpD.1.22522.seq
#    -bsequence pep-align/BSU36350___ywpD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05552___ywpD-BSU36350___ywpD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05552___ywpD-BSU36350___ywpD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05552___ywpD
# 2: BSU36350___ywpD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 278
# Identity:     264/278 (95.0%)
# Similarity:   267/278 (96.0%)
# Gaps:           0/278 ( 0.0%)
# Score: 1340.0
# 
#
#=======================================

BSNT_05552___      1 MKIRERFSMVDLPVLIITAAIIGHDKYKAFHAGANDILQKPYHYSEFMAR     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36350___yw      1 MKIRERFSMVDLPVLIITAAIIGHDKYKAFHAGANDILQKPYHYSEFMAR     50

BSNT_05552___     51 IQNLIMMKHTANQATRMEIAFLQSQIKPHFLYNVLNTIISLTHLDIEKAR    100
                     ||||||||||||||||||:|||||||||||||||||||||||||||||||
BSU36350___yw     51 IQNLIMMKHTANQATRMEMAFLQSQIKPHFLYNVLNTIISLTHLDIEKAR    100

BSNT_05552___    101 EVTEEFTNYLRMSFDFQNTSAISSFRHELSIINSYLSIEKTRFGNRLEVL    150
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU36350___yw    101 EVTEEFTNYLRMSFDFQNTSAISSFRHELSIINSYLSIEKTRFSNRLEVL    150

BSNT_05552___    151 FDIDEDIDFILPPLMIQPLVENAVLHGVSKKSGGGWIKLTAKKQSKNEYH    200
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU36350___yw    151 FDIDEDIDFILPPLMIQPLVENAVLHGVSKKRGGGWIKLTAKKQSKNEYH    200

BSNT_05552___    201 IKVKDNGAGMPPEKQKDLLSADFDRSVGLKNINQRLKHFCGSELMIISTP    250
                     |||:|||.|:.||||.||||.|||||||||||||||||||||||||.|||
BSU36350___yw    201 IKVEDNGPGITPEKQIDLLSTDFDRSVGLKNINQRLKHFCGSELMISSTP    250

BSNT_05552___    251 DAGTSVSMLIHLAETTESPAGLKDIERT    278
                     ||||||||||||||||.||..|||.|||
BSU36350___yw    251 DAGTSVSMLIHLAETTGSPKELKDTERT    278


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