Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05552 and BSU36350

See Amino acid alignment / Visit BSNT_05552 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:32
# Commandline: needle
#    -asequence dna-align/BSNT_05552___ywpD.1.22522.seq
#    -bsequence dna-align/BSU36350___ywpD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05552___ywpD-BSU36350___ywpD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05552___ywpD-BSU36350___ywpD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05552___ywpD
# 2: BSU36350___ywpD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 837
# Identity:     815/837 (97.4%)
# Similarity:   815/837 (97.4%)
# Gaps:           0/837 ( 0.0%)
# Score: 3987.0
# 
#
#=======================================

BSNT_05552___      1 ATGAAAATTCGCGAACGATTCAGCATGGTTGATCTTCCGGTTCTGATCAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36350___yw      1 ATGAAAATTCGCGAACGATTCAGCATGGTTGATCTTCCGGTTCTGATCAT     50

BSNT_05552___     51 TACAGCTGCCATTATCGGCCATGACAAATACAAGGCTTTTCATGCCGGAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36350___yw     51 TACAGCTGCCATTATCGGCCATGACAAATACAAGGCTTTTCATGCCGGAG    100

BSNT_05552___    101 CGAATGACATTTTGCAAAAACCCTATCATTACTCTGAATTTATGGCGCGT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36350___yw    101 CGAATGACATTTTGCAAAAACCCTATCATTACTCTGAATTTATGGCGCGT    150

BSNT_05552___    151 ATTCAAAACCTGATCATGATGAAACATACAGCAAATCAAGCCACAAGAAT    200
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU36350___yw    151 ATTCAAAACCTGATAATGATGAAACATACAGCAAATCAAGCCACAAGAAT    200

BSNT_05552___    201 GGAAATAGCGTTTCTCCAGTCGCAAATCAAGCCTCATTTTCTTTATAATG    250
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU36350___yw    201 GGAAATGGCGTTTCTCCAGTCGCAAATCAAGCCTCATTTTCTTTATAATG    250

BSNT_05552___    251 TATTAAACACGATTATTTCTCTCACTCATTTGGATATTGAAAAGGCCCGG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36350___yw    251 TATTAAACACGATTATTTCTCTCACTCATTTGGATATTGAAAAGGCCCGG    300

BSNT_05552___    301 GAGGTAACAGAGGAATTTACCAACTATTTAAGAATGAGTTTTGACTTTCA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36350___yw    301 GAGGTAACAGAGGAATTTACCAACTATTTAAGAATGAGTTTTGACTTTCA    350

BSNT_05552___    351 AAATACATCAGCCATCAGTTCCTTCAGACATGAGCTTTCGATTATCAATT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36350___yw    351 AAATACATCAGCCATCAGTTCCTTCAGACATGAGCTTTCGATTATCAATT    400

BSNT_05552___    401 CCTATCTTTCTATAGAAAAGACGCGATTCGGTAATCGGCTTGAGGTTCTT    450
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU36350___yw    401 CCTATCTTTCTATAGAAAAGACGCGATTCAGTAATCGGCTTGAGGTTCTT    450

BSNT_05552___    451 TTCGATATAGATGAAGACATTGACTTTATCCTTCCGCCTTTAATGATTCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36350___yw    451 TTCGATATAGATGAAGACATTGACTTTATCCTTCCGCCTTTAATGATTCA    500

BSNT_05552___    501 GCCCTTGGTGGAAAATGCCGTTCTTCACGGTGTCAGCAAGAAAAGTGGCG    550
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU36350___yw    501 GCCCTTGGTGGAAAATGCCGTTCTTCACGGTGTCAGCAAGAAAAGAGGCG    550

BSNT_05552___    551 GAGGATGGATCAAACTGACAGCTAAAAAACAAAGCAAAAATGAGTATCAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36350___yw    551 GAGGATGGATCAAACTGACAGCTAAAAAACAAAGCAAAAATGAGTATCAC    600

BSNT_05552___    601 ATCAAAGTAAAGGATAACGGTGCGGGGATGCCTCCGGAAAAACAAAAAGA    650
                     |||||||||.|||||||||||.|.|||||..|||||||||||||||.|||
BSU36350___yw    601 ATCAAAGTAGAGGATAACGGTCCCGGGATAACTCCGGAAAAACAAATAGA    650

BSNT_05552___    651 TCTCTTATCTGCGGATTTCGATCGCAGCGTCGGGTTGAAAAATATCAATC    700
                     |||||||||..|||||||.||||||||||||||.||||||||||||||||
BSU36350___yw    651 TCTCTTATCAACGGATTTTGATCGCAGCGTCGGATTGAAAAATATCAATC    700

BSNT_05552___    701 AGCGGCTGAAACATTTTTGCGGAAGCGAGTTGATGATCATCAGCACTCCG    750
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU36350___yw    701 AGCGGCTGAAACATTTTTGCGGAAGCGAGTTGATGATCAGCAGCACTCCG    750

BSNT_05552___    751 GATGCAGGCACCTCTGTCTCAATGCTCATTCATCTCGCTGAAACAACAGA    800
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU36350___yw    751 GATGCAGGCACCTCTGTCTCAATGCTCATTCATCTCGCTGAAACAACAGG    800

BSNT_05552___    801 AAGCCCCGCGGGACTGAAGGACATAGAACGAACCTAA    837
                     ||||||....|.|||||||||||.|||||||||||||
BSU36350___yw    801 AAGCCCTAAAGAACTGAAGGACACAGAACGAACCTAA    837


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