Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05496 and BSU36050
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:26
# Commandline: needle
# -asequence pep-align/BSNT_05496___cotB.1.22522.seq
# -bsequence pep-align/BSU36050___cotB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05496___cotB-BSU36050___cotB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05496___cotB-BSU36050___cotB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05496___cotB
# 2: BSU36050___cotB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 387
# Identity: 318/387 (82.2%)
# Similarity: 327/387 (84.5%)
# Gaps: 46/387 (11.9%)
# Score: 1565.0
#
#
#=======================================
BSNT_05496___ 1 MSKRRMKYHSNDEISYYNFLHSMKDKIVTVYRGGPESKKGKLAAVKSDYI 50
|||||||||||:||||||||||||||||||||||||||||||.|||||||
BSU36050___co 1 MSKRRMKYHSNNEISYYNFLHSMKDKIVTVYRGGPESKKGKLTAVKSDYI 50
BSNT_05496___ 51 ALQAEKKIIYYQLEHVKSITEDTNNSTTTIETEEMPDADDFHSLIGQLMN 100
|||||||||||||||||||||||||||||||||||.||||||||||.|:|
BSU36050___co 51 ALQAEKKIIYYQLEHVKSITEDTNNSTTTIETEEMLDADDFHSLIGHLIN 100
BSNT_05496___ 101 QSVQFNQGGPESKKGRLVWLGDDYAALNTNEDGVVYFNIHHIKSISKHEP 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36050___co 101 QSVQFNQGGPESKKGRLVWLGDDYAALNTNEDGVVYFNIHHIKSISKHEP 150
BSNT_05496___ 151 DLKIEGQTPSGVLEADYLSEVFKSLTHKWVSINRGGPEAIEGILVDNADG 200
|||||.|||.||||||.|||||||||||||||||||||||||||||||||
BSU36050___co 151 DLKIEEQTPVGVLEADDLSEVFKSLTHKWVSINRGGPEAIEGILVDNADG 200
BSNT_05496___ 201 HYTIVKNQEVLRIYPFHIKSISLGPKGSYKKEDEKNEHQNQEDSDDTDQK 250
|||||||||||||||||||||||||||||||||:||| |||||::|.|
BSU36050___co 201 HYTIVKNQEVLRIYPFHIKSISLGPKGSYKKEDQKNE-QNQEDNNDKD-- 247
BSNT_05496___ 251 EEVYSSSLISSKPYSSS------------------------SSSKSSKRS 276
|:|.||||.|||| |||||||||
BSU36050___co 248 ----SNSFISSKSYSSSKSSKRSLKSSDDQSSKSGRSSRSKSSSKSSKRS 293
BSNT_05496___ 277 SKSSDHRSSTSYSSSGSKS---------------SSKSSKRSPRSSDYQS 311
.||||::||.|..||.||| ||||||||||||||||
BSU36050___co 294 LKSSDYQSSKSGRSSRSKSSSKSSKRSLKSSDYQSSKSSKRSPRSSDYQS 343
BSNT_05496___ 312 SRSPGYSSSIKSSGKQKEDYSYETIVRTIDYHWKRKY 348
||||||||||||||||||||||||||||||||||||:
BSU36050___co 344 SRSPGYSSSIKSSGKQKEDYSYETIVRTIDYHWKRKF 380
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