Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05496 and BSU36050
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:26
# Commandline: needle
# -asequence dna-align/BSNT_05496___cotB.1.22522.seq
# -bsequence dna-align/BSU36050___cotB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05496___cotB-BSU36050___cotB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05496___cotB-BSU36050___cotB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05496___cotB
# 2: BSU36050___cotB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1164
# Identity: 966/1164 (83.0%)
# Similarity: 966/1164 (83.0%)
# Gaps: 138/1164 (11.9%)
# Score: 4483.0
#
#
#=======================================
BSNT_05496___ 1 ATGAGCAAGAGAAGAATGAAGTATCATTCAAATGATGAAATATCTTATTA 50
|||||||||||.||||||||.||||||||||||.||||||||||.|||||
BSU36050___co 1 ATGAGCAAGAGGAGAATGAAATATCATTCAAATAATGAAATATCGTATTA 50
BSNT_05496___ 51 TAACTTTTTGCATTCAATGAAAGATAAAATTGTTACTGTATATCGTGGAG 100
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU36050___co 51 TAACTTTTTGCACTCAATGAAAGATAAAATTGTTACTGTATATCGTGGAG 100
BSNT_05496___ 101 GTCCGGAATCTAAAAAAGGAAAATTAGCTGCTGTAAAATCAGATTATATT 150
||||||||||||||||||||||||||.|.||||||||||||||||||||.
BSU36050___co 101 GTCCGGAATCTAAAAAAGGAAAATTAACAGCTGTAAAATCAGATTATATA 150
BSNT_05496___ 151 GCTTTACAAGCTGAAAAAAAAATAATTTATTATCAGTTGGAGCATGTGAA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36050___co 151 GCTTTACAAGCTGAAAAAAAAATAATTTATTATCAGTTGGAGCATGTGAA 200
BSNT_05496___ 201 AAGTATTACTGAGGATACCAATAATAGCACCACAACAATTGAGACTGAGG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36050___co 201 AAGTATTACTGAGGATACCAATAATAGCACCACAACAATTGAGACTGAGG 250
BSNT_05496___ 251 AAATGCCCGACGCTGACGATTTTCATAGCTTAATCGGACAATTAATGAAC 300
||||||.|||.|||||.|||||||||||||||||||||||.|||||.|||
BSU36050___co 251 AAATGCTCGATGCTGATGATTTTCATAGCTTAATCGGACATTTAATAAAC 300
BSNT_05496___ 301 CAATCAGTTCAATTTAATCAAGGGGGTCCGGAATCTAAAAAAGGAAGATT 350
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU36050___co 301 CAATCAGTTCAATTTAACCAAGGGGGTCCGGAATCTAAAAAAGGAAGATT 350
BSNT_05496___ 351 GGTCTGGCTGGGAGATGATTACGCTGCGTTAAACACAAATGAGGATGGGG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36050___co 351 GGTCTGGCTGGGAGATGATTACGCTGCGTTAAACACAAATGAGGATGGGG 400
BSNT_05496___ 401 TAGTGTATTTTAATATCCATCACATAAAGAGTATAAGTAAACATGAGCCC 450
|||||||||||||||||||||||||.||.||||||||||||||.|||||.
BSU36050___co 401 TAGTGTATTTTAATATCCATCACATCAAAAGTATAAGTAAACACGAGCCT 450
BSNT_05496___ 451 GATTTGAAAATAGAAGGACAGACGCCATCAGGTGTCTTGGAAGCTGATTA 500
||||||||||||||||..|||||||||...||.||.||||||||||||.|
BSU36050___co 451 GATTTGAAAATAGAAGAGCAGACGCCAGTTGGAGTTTTGGAAGCTGATGA 500
BSNT_05496___ 501 TTTAAGCGAGGTTTTTAAGAGTCTGACTCATAAATGGGTTTCAATTAATC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36050___co 501 TTTAAGCGAGGTTTTTAAGAGTCTGACTCATAAATGGGTTTCAATTAATC 550
BSNT_05496___ 551 GTGGAGGTCCGGAAGCCATTGAGGGTATCCTTGTAGATAATGCCGACGGC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36050___co 551 GTGGAGGTCCGGAAGCCATTGAGGGTATCCTTGTAGATAATGCCGACGGC 600
BSNT_05496___ 601 CATTATACTATAGTGAAAAATCAAGAGGTGCTTCGCATCTATCCTTTTCA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36050___co 601 CATTATACTATAGTGAAAAATCAAGAGGTGCTTCGCATCTATCCTTTTCA 650
BSNT_05496___ 651 CATAAAAAGCATCAGCTTAGGCCCAAAAGGGTCGTACAAAAAAGAGGATG 700
|||||||||||||||||||||.|||||||||||||||||||||||||||.
BSU36050___co 651 CATAAAAAGCATCAGCTTAGGTCCAAAAGGGTCGTACAAAAAAGAGGATC 700
BSNT_05496___ 701 AAAAGAATGAGCATCAAAATCAGGAAGACAGCGATGATACAGATCAAAAA 750
||||.|||| |.|||||.||||||||||...||||||
BSU36050___co 701 AAAAAAATG---AACAAAACCAGGAAGACAATAATGATA----------- 736
BSNT_05496___ 751 GAAGAAGTGTACAGCAGTTCGTTAATTTCTTCAAAGCCATATAGCTCATC 800
.|.||||||.||||||.|||||||||||..|||||||||||||
BSU36050___co 737 -------AGGACAGCAATTCGTTCATTTCTTCAAAATCATATAGCTCATC 779
BSNT_05496___ 800 -------------------------------------------------- 800
BSU36050___co 780 AAAATCATCTAAACGATCACTAAAATCTTCAGATGATCAATCATCCAAAT 829
BSNT_05496___ 801 ----------------------AAGTTCATCAAAATCATCTAAACGATCA 828
||||||.|||||||||||||||||||||
BSU36050___co 830 CTGGTCGTTCGTCACGTTCAAAAAGTTCTTCAAAATCATCTAAACGATCA 879
BSNT_05496___ 829 TCAAAATCTTCAGATCATCGATCATCAACATCATACAGCTCATCAGGTTC 878
..|||||||||.|||.|||.||||||.|.|||...|.|.||.|||.||||
BSU36050___co 880 CTAAAATCTTCGGATTATCAATCATCCAAATCTGGCCGTTCGTCACGTTC 929
BSNT_05496___ 879 AAAGAGT------------------------------------------- 885
|||.|||
BSU36050___co 930 AAAAAGTTCTTCAAAATCATCTAAACGATCATTAAAATCTTCAGATTATC 979
BSNT_05496___ 886 --TCATCAAAATCATCTAAACGATCGCCAAGATCATCAGATTATCAATCA 933
|||||||||||||||||||||||.||||||||.|||||||||||||||
BSU36050___co 980 AATCATCAAAATCATCTAAACGATCACCAAGATCTTCAGATTATCAATCA 1029
BSNT_05496___ 934 TCAAGATCACCAGGTTATTCAAGTTCAATAAAAAGTTCAGGAAAACAAAA 983
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU36050___co 1030 TCAAGATCACCAGGCTATTCAAGTTCAATAAAAAGTTCAGGAAAACAAAA 1079
BSNT_05496___ 984 GGAAGATTATAGCTATGAAACGATTGTCAGAACGATAGACTATCACTGGA 1033
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36050___co 1080 GGAAGATTATAGCTATGAAACGATTGTCAGAACGATAGACTATCACTGGA 1129
BSNT_05496___ 1034 AACGTAAATATTAA 1047
|||||||||.||||
BSU36050___co 1130 AACGTAAATTTTAA 1143
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