Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05480 and BSU35950
See
DNA alignment /
Visit
BSNT_05480 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:24
# Commandline: needle
# -asequence pep-align/BSNT_05480___rbsC.1.22522.seq
# -bsequence pep-align/BSU35950___rbsC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05480___rbsC-BSU35950___rbsC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05480___rbsC-BSU35950___rbsC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05480___rbsC
# 2: BSU35950___rbsC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity: 320/322 (99.4%)
# Similarity: 320/322 (99.4%)
# Gaps: 0/322 ( 0.0%)
# Score: 1561.0
#
#
#=======================================
BSNT_05480___ 1 MKTEQLQTEQKRIHFDGVMQKLGPFLGLFILVIIVSILNPSFLEPLNILN 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35950___rb 1 MKTEQLQTEQKRIHFDGVMQKLGPFLGLFILVIIVSILNPSFLEPLNILN 50
BSNT_05480___ 51 LLRQVAINGLIAFGMTFVILTGGIDLSVGAILALSSALVAGMIVSGVDPV 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35950___rb 51 LLRQVAINGLIAFGMTFVILTGGIDLSVGAILALSSALVAGMIVSGVDPV 100
BSNT_05480___ 101 LAIILGCIIGAVLGMINGLLITKGKMAPFIATLATMTVFRGLTLVYTDGN 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35950___rb 101 LAIILGCIIGAVLGMINGLLITKGKMAPFIATLATMTVFRGLTLVYTDGN 150
BSNT_05480___ 151 PITGLGTNYAFQMFGCGYFLGIPVPAITMVLAFVILWVLLHKTPFGRRTY 200
|||||||||.|||||.||||||||||||||||||||||||||||||||||
BSU35950___rb 151 PITGLGTNYGFQMFGRGYFLGIPVPAITMVLAFVILWVLLHKTPFGRRTY 200
BSNT_05480___ 201 AIGGNEKAALISGIKVTRVKVMIYSLAGLLSALAGAILTSRLHSAQPTAG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35950___rb 201 AIGGNEKAALISGIKVTRVKVMIYSLAGLLSALAGAILTSRLHSAQPTAG 250
BSNT_05480___ 251 ESYELDAIAAVVLGGTSLSGGRGRIVGTLIGVLIIGTLNNGLNLLGVSSF 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35950___rb 251 ESYELDAIAAVVLGGTSLSGGRGRIVGTLIGVLIIGTLNNGLNLLGVSSF 300
BSNT_05480___ 301 YQLVVKGIVILIAVLLDRKKSA 322
||||||||||||||||||||||
BSU35950___rb 301 YQLVVKGIVILIAVLLDRKKSA 322
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.