Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05480 and BSU35950
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:24
# Commandline: needle
# -asequence dna-align/BSNT_05480___rbsC.1.22522.seq
# -bsequence dna-align/BSU35950___rbsC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05480___rbsC-BSU35950___rbsC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05480___rbsC-BSU35950___rbsC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05480___rbsC
# 2: BSU35950___rbsC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 969
# Identity: 949/969 (97.9%)
# Similarity: 949/969 (97.9%)
# Gaps: 0/969 ( 0.0%)
# Score: 4665.0
#
#
#=======================================
BSNT_05480___ 1 ATGAAAACGGAACAACTGCAAACAGAACAAAAACGGATTCACTTCGACGG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35950___rb 1 ATGAAAACGGAACAACTGCAAACAGAACAAAAACGGATTCACTTCGACGG 50
BSNT_05480___ 51 AGTCATGCAAAAACTCGGCCCGTTTCTTGGTTTATTTATTCTCGTTATCA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35950___rb 51 AGTCATGCAAAAACTCGGCCCGTTTCTTGGTTTATTTATTCTCGTTATCA 100
BSNT_05480___ 101 TTGTATCTATTTTAAATCCAAGCTTTCTTGAACCGCTGAATATTTTAAAC 150
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU35950___rb 101 TTGTATCTATTTTAAATCCCAGCTTTCTTGAACCGCTGAATATTTTAAAC 150
BSNT_05480___ 151 CTGCTTCGACAGGTCGCCATTAACGGATTAATCGCGTTCGGGATGACCTT 200
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU35950___rb 151 CTGCTTCGCCAGGTCGCCATTAACGGATTAATCGCGTTCGGGATGACCTT 200
BSNT_05480___ 201 TGTCATTTTGACAGGCGGCATTGATCTTTCTGTCGGCGCTATTCTTGCCC 250
|||.|||||||||||||||||||||||||||||.||||||||||||||||
BSU35950___rb 201 TGTTATTTTGACAGGCGGCATTGATCTTTCTGTTGGCGCTATTCTTGCCC 250
BSNT_05480___ 251 TGTCAAGTGCTTTAGTTGCGGGAATGATTGTATCCGGTGTTGATCCGGTT 300
||||.|||||||||||||||||.||||||||.||||||||.|||||||||
BSU35950___rb 251 TGTCCAGTGCTTTAGTTGCGGGGATGATTGTGTCCGGTGTCGATCCGGTT 300
BSNT_05480___ 301 CTCGCGATCATCCTTGGCTGTATCATTGGTGCCGTACTAGGCATGATCAA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35950___rb 301 CTCGCGATCATCCTTGGCTGTATCATTGGTGCCGTACTAGGCATGATCAA 350
BSNT_05480___ 351 CGGATTATTGATTACTAAAGGAAAAATGGCGCCCTTTATCGCCACGCTTG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35950___rb 351 CGGATTATTGATTACTAAAGGAAAAATGGCGCCCTTTATCGCCACGCTTG 400
BSNT_05480___ 401 CGACCATGACTGTGTTTCGCGGACTGACGCTAGTGTATACAGATGGAAAT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35950___rb 401 CGACCATGACTGTGTTTCGCGGACTGACGCTAGTGTATACAGATGGAAAT 450
BSNT_05480___ 451 CCGATTACCGGACTTGGCACAAACTACGCTTTTCAGATGTTCGGATGCGG 500
||||||||||||||||||||||||||||.||||||||||||||||.||||
BSU35950___rb 451 CCGATTACCGGACTTGGCACAAACTACGGTTTTCAGATGTTCGGACGCGG 500
BSNT_05480___ 501 TTACTTTTTAGGCATTCCTGTACCGGCGATTACGATGGTTCTTGCCTTTG 550
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU35950___rb 501 TTACTTTTTAGGCATTCCTGTACCGGCAATTACGATGGTTCTTGCCTTTG 550
BSNT_05480___ 551 TCATCCTTTGGGTGCTTCTTCATAAAACACCATTCGGCCGCCGAACGTAC 600
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU35950___rb 551 TCATCCTTTGGGTGCTTCTTCATAAAACACCATTCGGACGCCGAACGTAC 600
BSNT_05480___ 601 GCTATCGGCGGCAACGAAAAAGCCGCTCTCATTTCAGGCATCAAAGTGAC 650
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU35950___rb 601 GCTATCGGCGGCAACGAAAAAGCCGCGCTCATTTCAGGCATCAAAGTGAC 650
BSNT_05480___ 651 GCGCGTGAAAGTGATGATCTATTCTTTAGCCGGGCTTTTATCCGCTCTTG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35950___rb 651 GCGCGTGAAAGTGATGATCTATTCTTTAGCCGGGCTTTTATCCGCTCTTG 700
BSNT_05480___ 701 CAGGTGCCATATTGACTTCCCGCCTGCATTCGGCCCAGCCGACTGCGGGG 750
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU35950___rb 701 CAGGTGCCATATTGACTTCCCGCCTGCATTCGGCCCAGCCGACTGCGGGA 750
BSNT_05480___ 751 GAATCGTACGAACTTGATGCTATCGCGGCAGTCGTCTTAGGCGGAACAAG 800
|||||||||||||||||||||||||||||||||||||||||.||.|||||
BSU35950___rb 751 GAATCGTACGAACTTGATGCTATCGCGGCAGTCGTCTTAGGAGGGACAAG 800
BSNT_05480___ 801 TCTTTCCGGCGGCCGAGGACGCATTGTTGGCACGTTAATCGGGGTGCTGA 850
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU35950___rb 801 TCTTTCCGGCGGCCGAGGACGCATTGTCGGCACGTTAATCGGGGTGCTGA 850
BSNT_05480___ 851 TCATCGGCACACTTAATAACGGGCTTAATCTGCTTGGCGTCTCATCATTT 900
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU35950___rb 851 TCATCGGCACACTTAATAACGGACTTAATCTGCTTGGCGTCTCATCATTT 900
BSNT_05480___ 901 TATCAGCTGGTTGTCAAAGGGATTGTCATCTTAATTGCGGTATTGTTAGA 950
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU35950___rb 901 TATCAGCTGGTTGTCAAAGGGATTGTTATCTTAATTGCGGTATTGTTAGA 950
BSNT_05480___ 951 CCGCAAGAAGTCAGCATAG 969
|||||||||||||||.|||
BSU35950___rb 951 CCGCAAGAAGTCAGCTTAG 969
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