Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05440 and BSU35670

See DNA alignment / Visit BSNT_05440 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:19
# Commandline: needle
#    -asequence pep-align/BSNT_05440___gtaB.1.22522.seq
#    -bsequence pep-align/BSU35670___gtaB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05440___gtaB-BSU35670___gtaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05440___gtaB-BSU35670___gtaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05440___gtaB
# 2: BSU35670___gtaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 292
# Identity:     269/292 (92.1%)
# Similarity:   282/292 (96.6%)
# Gaps:           0/292 ( 0.0%)
# Score: 1398.0
# 
#
#=======================================

BSNT_05440___      1 MKKVRKAIIPAAGLGTRFLPATKAMPKEMLPIVDKPTIQYIIEEAVEAGI     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35670___gt      1 MKKVRKAIIPAAGLGTRFLPATKAMPKEMLPIVDKPTIQYIIEEAVEAGI     50

BSNT_05440___     51 EDIIIVTGKSKRAIEDHFDFSPELERNLEEKGKTELLEKVKKASNLADIH    100
                     |||||||||||||||||||:||||||||||||||||||||||||||||||
BSU35670___gt     51 EDIIIVTGKSKRAIEDHFDYSPELERNLEEKGKTELLEKVKKASNLADIH    100

BSNT_05440___    101 YIRQKEPKGLGHAVWCARNFIGDEPFAVLLGDDIVQGEKPGLRQLMDEYE    150
                     ||||||||||||||||||||||||||||||||||||.|.|||||||||||
BSU35670___gt    101 YIRQKEPKGLGHAVWCARNFIGDEPFAVLLGDDIVQAETPGLRQLMDEYE    150

BSNT_05440___    151 KTLSSVIGVQQVPEDQTHRYGIIDPLTNEGRLYQVKNFVEKPKPGTAPSN    200
                     |||||:||||||||::|||||||||||:|||.||||||||||..||||||
BSU35670___gt    151 KTLSSIIGVQQVPEEETHRYGIIDPLTSEGRRYQVKNFVEKPPKGTAPSN    200

BSNT_05440___    201 LAILGRYVFTPEIFMYLDKQQIGAGGEIQLTDAIQQLNEIQRVFAYDFEG    250
                     |||||||||||||||||::||:|||||||||||||:||||||||||||||
BSU35670___gt    201 LAILGRYVFTPEIFMYLEEQQVGAGGEIQLTDAIQKLNEIQRVFAYDFEG    250

BSNT_05440___    251 KRYDVGEKLGFIQTTLEFAMQDSELKDSLIPFMQDLLSKEEF    292
                     ||||||||||||.|||||||||.||:|.|:|||:.||:|||.
BSU35670___gt    251 KRYDVGEKLGFITTTLEFAMQDKELRDQLVPFMEGLLNKEEI    292


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