Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05440 and BSU35670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:19
# Commandline: needle
# -asequence dna-align/BSNT_05440___gtaB.1.22522.seq
# -bsequence dna-align/BSU35670___gtaB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05440___gtaB-BSU35670___gtaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05440___gtaB-BSU35670___gtaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05440___gtaB
# 2: BSU35670___gtaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 889
# Identity: 695/889 (78.2%)
# Similarity: 695/889 (78.2%)
# Gaps: 20/889 ( 2.2%)
# Score: 2702.5
#
#
#=======================================
BSNT_05440___ 1 TTGAAGAAAGTTCGTAAAGCGATAATTCCCGCAGCGGGCCTTGGGACACG 50
.||||.|||||.||||||||.||||||||.|||||.|||.|.||.|||||
BSU35670___gt 1 ATGAAAAAAGTACGTAAAGCCATAATTCCAGCAGCAGGCTTAGGAACACG 50
BSNT_05440___ 51 TTTCCTCCCTGCAACGAAAGCGATGCCTAAAGAAATGCTTCCAATCGTAG 100
|||.||.||.||.||||||||.|||||.||||||||||||||.|||||.|
BSU35670___gt 51 TTTTCTTCCGGCTACGAAAGCAATGCCGAAAGAAATGCTTCCTATCGTTG 100
BSNT_05440___ 101 ATAAGCCAACTATTCAATATATTATTGAAGAAGCCGTTGAAGCCGGCATT 150
||||.||.||.||||||||.||.|||||||||||.|||||||||||.|||
BSU35670___gt 101 ATAAACCTACCATTCAATACATAATTGAAGAAGCTGTTGAAGCCGGTATT 150
BSNT_05440___ 151 GAAGATATTATCATCGTAACAGGTAAAAGCAAACGAGCGATTGAAGACCA 200
|||||||||||.|||||||||||.||||||||.||.||||||||.||.||
BSU35670___gt 151 GAAGATATTATTATCGTAACAGGAAAAAGCAAGCGTGCGATTGAGGATCA 200
BSNT_05440___ 201 TTTCGATTTCTCGCCGGAACTCGAAAGAAACCTTGAGGAAAAGGGTAAAA 250
|||.||||.|||.||.||.||.|||||||||||.||.|||||.||.||||
BSU35670___gt 201 TTTTGATTACTCTCCTGAGCTTGAAAGAAACCTAGAAGAAAAAGGAAAAA 250
BSNT_05440___ 251 CCGAACTGCTTGAAAAAGTAAAAAAAGCGTCAAACCTCGCTGATATTCAC 300
|.||.||||||||||||||.|||||.||.||.|||||.|||||.||||||
BSU35670___gt 251 CTGAGCTGCTTGAAAAAGTGAAAAAGGCTTCTAACCTGGCTGACATTCAC 300
BSNT_05440___ 301 TATATTCGCCAAAAAGAACCAAAAGGACTTGGGCATGCCGTTTGGTGCGC 350
|||||.||||||||||||||.|||||.||.||.|||||.||.||||||||
BSU35670___gt 301 TATATCCGCCAAAAAGAACCTAAAGGTCTCGGACATGCTGTCTGGTGCGC 350
BSNT_05440___ 351 ACGCAACTTTATTGGAGACGAGCCATTCGCAGTTCTCCTTGGAGACGACA 400
||||||||||||.||.||.|||||.||.||.||.||.|||||.|||||.|
BSU35670___gt 351 ACGCAACTTTATCGGCGATGAGCCGTTTGCGGTACTGCTTGGTGACGATA 400
BSNT_05440___ 401 TTGTCCAAGGAGAAAAACCTGGTCTTCGCCAGCTGATGGACGAGTACGAA 450
||||.||.|..||||..||.||..|.|||||..|.|||||.||.||.|||
BSU35670___gt 401 TTGTTCAGGCTGAAACTCCAGGGTTGCGCCAATTAATGGATGAATATGAA 450
BSNT_05440___ 451 AAGACTCTCTCTTCCGTTATTGGCGTTCAGCAAGTACCTGAAGACCAAAC 500
||.||.||.|||||..||||.||.||||||||.||.||.|||||..||||
BSU35670___gt 451 AAAACACTTTCTTCTATTATCGGTGTTCAGCAGGTGCCCGAAGAAGAAAC 500
BSNT_05440___ 501 GCATCGCTACGGAATCATTGATCCTCTGACAAACGAAGGGCGCCTATATC 550
.||.||||||||.||.|||||.||.|||||||..|||||.||||..||||
BSU35670___gt 501 ACACCGCTACGGCATTATTGACCCGCTGACAAGTGAAGGCCGCCGTTATC 550
BSNT_05440___ 551 AGGTCAAAAACTTTGTAGAAAAACC----AAAACCGGGCACGGCACCGTC 596
||||.||||||||.||.|||||||| ||| |||||.|||||.||
BSU35670___gt 551 AGGTGAAAAACTTCGTTGAAAAACCGCCTAAA----GGCACAGCACCTTC 596
BSNT_05440___ 597 TAACCTTGCGATTTTGGGACGGTATGTCTTTACTCCTGAAATTTTCATGT 646
|||.|||||.||.||.||.||.||.||.||.||.|||||.||.|||||||
BSU35670___gt 597 TAATCTTGCCATCTTAGGCCGTTACGTATTCACGCCTGAGATCTTCATGT 646
BSNT_05440___ 647 ACTTAGATAAACAGCAAATCGGTGCAGGGGGAGAGATCCAGCTGACCGAT 696
|.|||||..|.|||||..|.||.||.||.|||||.||.|||||.||.||.
BSU35670___gt 647 ATTTAGAAGAGCAGCAGGTTGGCGCCGGCGGAGAAATTCAGCTCACAGAC 696
BSNT_05440___ 697 GCTATTCAGCAGTTAAACGAAATCCAGCGCGTATTTGCTTATGACTTTGA 746
||.|||||..||.|.||.|||||.||..|.||.||||||||.||.|||||
BSU35670___gt 697 GCCATTCAAAAGCTGAATGAAATTCAAAGAGTGTTTGCTTACGATTTTGA 746
BSNT_05440___ 747 AGGCAAACGCTATGATGTTGGAGAAAAACTCGGTTTTATC-CAGACAACT 795
||||||.||.|||||||||||.|||||.|||||.|||||| || ||||||
BSU35670___gt 747 AGGCAAGCGTTATGATGTTGGTGAAAAGCTCGGCTTTATCACA-ACAACT 795
BSNT_05440___ 796 CTCGAATTTGCCATGCAGGACAGCGAACT----GAAGGATTCA-CTGATT 840
||.||||||||.||||||||.|..||.|| || ||| ||..||
BSU35670___gt 796 CTTGAATTTGCGATGCAGGATAAAGAGCTTCGCGA-----TCAGCTCGTT 840
BSNT_05440___ 841 CCATTTATGCAGGACCTTCTGTCAAAAGAAGAATTTTAA 879
|||||||||.|.|...|.||....|||||||||.|.|||
BSU35670___gt 841 CCATTTATGGAAGGTTTACTAAACAAAGAAGAAATCTAA 879
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