Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05306 and BSU34870

See DNA alignment / Visit BSNT_05306 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:01
# Commandline: needle
#    -asequence pep-align/BSNT_05306___hisF.1.22522.seq
#    -bsequence pep-align/BSU34870___hisF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05306___hisF-BSU34870___hisF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05306___hisF-BSU34870___hisF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05306___hisF
# 2: BSU34870___hisF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 252
# Identity:     250/252 (99.2%)
# Similarity:   251/252 (99.6%)
# Gaps:           0/252 ( 0.0%)
# Score: 1269.0
# 
#
#=======================================

BSNT_05306___      1 MITKRIIPCLDVKEGRVVKGIQFLELKDAGDPVELAEVYDREGADELVFL     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34870___hi      1 MITKRIIPCLDVKEGRVVKGIQFLELKDAGDPVELAEVYDREGADELVFL     50

BSNT_05306___     51 DISASHEGRKTMIDVVEQVAAKLAIPFTVGGGINQLSDMKTILRAGADKV    100
                     ||||||||||||:|||||||||||||||||||||||||||||||||||||
BSU34870___hi     51 DISASHEGRKTMVDVVEQVAAKLAIPFTVGGGINQLSDMKTILRAGADKV    100

BSNT_05306___    101 SVNTAAVLRPELITEGAEFFGSQCIVLAIDAKYDKESDTYKVYTHGGRKK    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34870___hi    101 SVNTAAVLRPELITEGAEFFGSQCIVLAIDAKYDKESDTYKVYTHGGRKK    150

BSNT_05306___    151 TDWEVTAWAKEGVKRGAGEILLTSMDSDGEKKGFDHTLTKLVSETVPVPV    200
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU34870___hi    151 TDWEVTAWAKEGVKRGAGEILLTSMDSDGEKKGFDHTLTKLVSEAVPVPV    200

BSNT_05306___    201 IASGGAGNAQHMLEAFTKGEADAALAASIFHYKETSIKEVKSYLKEYGVN    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34870___hi    201 IASGGAGNAQHMLEAFTKGEADAALAASIFHYKETSIKEVKSYLKEYGVN    250

BSNT_05306___    251 VR    252
                     ||
BSU34870___hi    251 VR    252


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.