Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_05306 and BSU34870

See Amino acid alignment / Visit BSNT_05306 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:01
# Commandline: needle
#    -asequence dna-align/BSNT_05306___hisF.1.22522.seq
#    -bsequence dna-align/BSU34870___hisF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05306___hisF-BSU34870___hisF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05306___hisF-BSU34870___hisF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05306___hisF
# 2: BSU34870___hisF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 759
# Identity:     741/759 (97.6%)
# Similarity:   741/759 (97.6%)
# Gaps:           0/759 ( 0.0%)
# Score: 3633.0
# 
#
#=======================================

BSNT_05306___      1 ATGATCACAAAACGGATTATTCCATGCCTTGATGTCAAAGAAGGACGCGT     50
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU34870___hi      1 ATGATCACAAAACGGATTATCCCATGCCTTGATGTCAAAGAAGGACGCGT     50

BSNT_05306___     51 TGTCAAAGGAATTCAATTTCTCGAATTGAAGGATGCAGGTGACCCAGTTG    100
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU34870___hi     51 TGTCAAAGGAATTCAATTTCTCGAATTGAAGGATGCCGGTGACCCAGTTG    100

BSNT_05306___    101 AACTCGCTGAAGTGTACGACCGGGAAGGTGCGGATGAACTTGTTTTTCTT    150
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU34870___hi    101 AACTCGCCGAAGTGTACGACCGGGAAGGTGCGGATGAACTTGTTTTTCTT    150

BSNT_05306___    151 GATATCTCCGCCTCACATGAAGGACGAAAGACGATGATTGACGTTGTGGA    200
                     ||||||||||||||.||.||||||||||||||||||.|||||||||||||
BSU34870___hi    151 GATATCTCCGCCTCGCACGAAGGACGAAAGACGATGGTTGACGTTGTGGA    200

BSNT_05306___    201 GCAGGTTGCCGCGAAGCTTGCGATTCCGTTTACAGTCGGCGGCGGCATCA    250
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU34870___hi    201 GCAGGTTGCCGCGAAGCTTGCCATTCCGTTTACAGTCGGCGGCGGCATCA    250

BSNT_05306___    251 ATCAGCTCAGCGATATGAAAACGATACTGCGTGCCGGAGCGGACAAAGTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34870___hi    251 ATCAGCTCAGCGATATGAAAACGATACTGCGTGCCGGAGCGGACAAAGTG    300

BSNT_05306___    301 TCGGTGAACACGGCAGCTGTTCTTCGCCCCGAGCTGATTACAGAAGGAGC    350
                     |||||||||||||||||||||||.|||||.||||||||||||||||||||
BSU34870___hi    301 TCGGTGAACACGGCAGCTGTTCTCCGCCCTGAGCTGATTACAGAAGGAGC    350

BSNT_05306___    351 CGAGTTTTTCGGTTCGCAATGCATCGTTCTTGCCATTGATGCCAAGTATG    400
                     |||||||||||||||.|||||||||||.||||||||||||||||||||||
BSU34870___hi    351 CGAGTTTTTCGGTTCTCAATGCATCGTACTTGCCATTGATGCCAAGTATG    400

BSNT_05306___    401 ACAAAGAATCTGACACATATAAGGTCTATACGCACGGCGGCAGAAAGAAA    450
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU34870___hi    401 ACAAAGAATCTGACACATATAAGGTCTACACGCACGGCGGCAGAAAGAAA    450

BSNT_05306___    451 ACAGATTGGGAGGTCACCGCGTGGGCAAAAGAAGGCGTCAAACGCGGGGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34870___hi    451 ACAGATTGGGAGGTCACCGCGTGGGCAAAAGAAGGCGTCAAACGCGGGGC    500

BSNT_05306___    501 GGGAGAAATATTGCTGACAAGCATGGACTCTGACGGTGAGAAAAAAGGCT    550
                     .|||||||||||||||||||||||||||||.|||||||||||||||||.|
BSU34870___hi    501 AGGAGAAATATTGCTGACAAGCATGGACTCCGACGGTGAGAAAAAAGGTT    550

BSNT_05306___    551 TCGACCACACGCTGACAAAGCTTGTTTCCGAAACTGTCCCCGTCCCTGTT    600
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU34870___hi    551 TCGACCACACGCTGACAAAGCTTGTTTCCGAAGCTGTCCCCGTCCCTGTT    600

BSNT_05306___    601 ATCGCTTCGGGAGGCGCGGGAAACGCGCAGCATATGCTTGAGGCTTTTAC    650
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU34870___hi    601 ATCGCTTCGGGAGGCGCGGGAAACGCACAGCATATGCTTGAGGCTTTTAC    650

BSNT_05306___    651 AAAAGGAGAAGCCGACGCTGCGCTGGCCGCCTCAATTTTTCATTATAAAG    700
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU34870___hi    651 AAAAGGAGAAGCCGACGCCGCGCTGGCCGCCTCAATTTTTCATTATAAAG    700

BSNT_05306___    701 AAACATCGATTAAAGAAGTGAAATCATACTTGAAAGAGTACGGGGTGAAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34870___hi    701 AAACATCGATTAAAGAAGTGAAATCATACTTGAAAGAGTACGGGGTGAAT    750

BSNT_05306___    751 GTGAGATGA    759
                     |||||||||
BSU34870___hi    751 GTGAGATGA    759


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.