Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05296 and BSU34790

See DNA alignment / Visit BSNT_05296 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:59
# Commandline: needle
#    -asequence pep-align/BSNT_05296___trxB.1.22522.seq
#    -bsequence pep-align/BSU34790___trxB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05296___trxB-BSU34790___trxB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05296___trxB-BSU34790___trxB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05296___trxB
# 2: BSU34790___trxB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 316
# Identity:     308/316 (97.5%)
# Similarity:   309/316 (97.8%)
# Gaps:           7/316 ( 2.2%)
# Score: 1570.0
# 
#
#=======================================

BSNT_05296___      1 MSEEKIYDVIIIGAGPAGMTAAVYTSRANLSTLMIERGIPGGQMANTEDV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34790___tr      1 MSEEKIYDVIIIGAGPAGMTAAVYTSRANLSTLMIERGIPGGQMANTEDV     50

BSNT_05296___     51 ENYPGFESILGPELSNKMFEHAKKFGAEYAYGDIKEVIDGKEYKVVKAGS    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34790___tr     51 ENYPGFESILGPELSNKMFEHAKKFGAEYAYGDIKEVIDGKEYKVVKAGS    100

BSNT_05296___    101 KEYKARAVIIAAGAEYKKIGVPGEKELGGRGVSYCAVCDGAFFKGKELVV    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34790___tr    101 KEYKARAVIIAAGAEYKKIGVPGEKELGGRGVSYCAVCDGAFFKGKELVV    150

BSNT_05296___    151 VGGGDSAVEEGVYLTRFASKVTIVHRRDKLRAQSILQARAFDNEKVDFLW    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34790___tr    151 VGGGDSAVEEGVYLTRFASKVTIVHRRDKLRAQSILQARAFDNEKVDFLW    200

BSNT_05296___    201 NKTVKEIHEENGKVGNVTLVDTVTGEESEFKTDGVFIYIGMLPLSKPFEN    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34790___tr    201 NKTVKEIHEENGKVGNVTLVDTVTGEESEFKTDGVFIYIGMLPLSKPFEN    250

BSNT_05296___    251 LGITNEEGYIETNERMETKVEGIFAAGDIREKSLRQIVTATGDGSIAAQS    300
                     |||||||||||||:||||||||||||||||||||||||||||||||||||
BSU34790___tr    251 LGITNEEGYIETNDRMETKVEGIFAAGDIREKSLRQIVTATGDGSIAAQS    300

BSNT_05296___    301 VQHYVEELQ-------    309
                     |||||||||       
BSU34790___tr    301 VQHYVEELQETLKTLK    316


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.