Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05296 and BSU34790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:59
# Commandline: needle
# -asequence dna-align/BSNT_05296___trxB.1.22522.seq
# -bsequence dna-align/BSU34790___trxB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05296___trxB-BSU34790___trxB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05296___trxB-BSU34790___trxB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05296___trxB
# 2: BSU34790___trxB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 951
# Identity: 918/951 (96.5%)
# Similarity: 918/951 (96.5%)
# Gaps: 21/951 ( 2.2%)
# Score: 4542.0
#
#
#=======================================
BSNT_05296___ 1 GTGTCAGAAGAAAAAATTTATGACGTGATTATAATCGGCGCGGGCCCTGC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34790___tr 1 GTGTCAGAAGAAAAAATTTATGACGTGATTATAATCGGCGCGGGCCCTGC 50
BSNT_05296___ 51 TGGGATGACGGCCGCTGTATACACATCAAGAGCGAATTTATCGACATTAA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34790___tr 51 TGGGATGACGGCCGCTGTATACACATCAAGAGCGAATTTATCGACATTAA 100
BSNT_05296___ 101 TGATTGAAAGAGGAATTCCTGGCGGACAAATGGCCAATACGGAAGATGTA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34790___tr 101 TGATTGAAAGAGGAATTCCTGGCGGACAAATGGCCAATACGGAAGATGTA 150
BSNT_05296___ 151 GAAAACTATCCTGGATTCGAAAGTATCCTTGGGCCTGAGCTTTCTAACAA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34790___tr 151 GAAAACTATCCTGGATTCGAAAGTATCCTTGGGCCTGAGCTTTCTAACAA 200
BSNT_05296___ 201 AATGTTTGAACACGCGAAAAAATTCGGCGCTGAATACGCTTATGGCGATA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34790___tr 201 AATGTTTGAACACGCGAAAAAATTCGGCGCTGAATACGCTTATGGCGATA 250
BSNT_05296___ 251 TTAAAGAGGTCATTGACGGCAAAGAGTACAAAGTAGTCAAAGCTGGTTCA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34790___tr 251 TTAAAGAGGTCATTGACGGCAAAGAGTACAAAGTAGTCAAAGCTGGTTCA 300
BSNT_05296___ 301 AAGGAATATAAAGCCCGTGCTGTCATCATTGCTGCAGGTGCGGAATATAA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34790___tr 301 AAGGAATATAAAGCCCGTGCTGTCATCATTGCTGCAGGTGCGGAATATAA 350
BSNT_05296___ 351 AAAAATCGGCGTGCCTGGCGAAAAAGAATTGGGCGGACGCGGTGTATCTT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34790___tr 351 AAAAATCGGCGTGCCTGGCGAAAAAGAATTGGGCGGACGCGGTGTATCTT 400
BSNT_05296___ 401 ATTGTGCAGTATGTGACGGCGCTTTCTTTAAAGGCAAAGAACTTGTCGTT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34790___tr 401 ATTGTGCAGTATGTGACGGCGCTTTCTTTAAAGGCAAAGAACTTGTCGTT 450
BSNT_05296___ 451 GTTGGCGGCGGAGATTCCGCGGTTGAAGAAGGCGTATATCTGACTCGTTT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34790___tr 451 GTTGGCGGCGGAGATTCCGCGGTTGAAGAAGGCGTATATCTGACTCGTTT 500
BSNT_05296___ 501 CGCTTCAAAAGTAACGATTGTTCACAGACGTGATAAACTCCGTGCTCAAA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34790___tr 501 CGCTTCAAAAGTAACGATTGTTCACAGACGTGATAAACTCCGTGCTCAAA 550
BSNT_05296___ 551 GTATTCTTCAAGCGAGAGCATTTGATAATGAAAAAGTTGACTTCCTATGG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34790___tr 551 GTATTCTTCAAGCGAGAGCATTTGATAATGAAAAAGTTGACTTCCTATGG 600
BSNT_05296___ 601 AACAAAACCGTGAAGGAAATTCATGAGGAAAACGGCAAAGTCGGTAACGT 650
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU34790___tr 601 AACAAAACTGTGAAGGAAATTCATGAGGAAAACGGCAAAGTCGGTAACGT 650
BSNT_05296___ 651 AACGCTTGTCGATACGGTAACCGGTGAAGAAAGTGAATTCAAAACAGACG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34790___tr 651 AACGCTTGTCGATACGGTAACCGGTGAAGAAAGTGAATTCAAAACAGACG 700
BSNT_05296___ 701 GCGTATTCATTTACATCGGCATGCTTCCTCTGTCTAAACCGTTTGAAAAT 750
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU34790___tr 701 GCGTATTCATTTACATCGGCATGCTTCCTCTGTCTAAACCGTTTGAAAAC 750
BSNT_05296___ 751 CTGGGCATTACGAATGAAGAAGGCTACATCGAAACAAACGAACGCATGGA 800
||||||||||||||||||||||||||.||||||||||||||.||||||||
BSU34790___tr 751 CTGGGCATTACGAATGAAGAAGGCTATATCGAAACAAACGACCGCATGGA 800
BSNT_05296___ 801 GACAAAGGTTGAAGGAATTTTCGCTGCCGGAGACATTCGCGAAAAATCAC 850
.||.|||||||||||.||||||||||||||||||||.|||||||||||||
BSU34790___tr 801 AACTAAGGTTGAAGGGATTTTCGCTGCCGGAGACATCCGCGAAAAATCAC 850
BSNT_05296___ 851 TGCGCCAAATCGTAACGGCTACAGGAGACGGAAGTATTGCGGCACAAAGC 900
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU34790___tr 851 TGCGCCAAATCGTAACGGCTACAGGAGACGGAAGCATTGCGGCACAAAGC 900
BSNT_05296___ 901 GTACAGCATTATGTCGAAGAGCTTCAATAA-------------------- 930
|||||.|||||||||||||||||.|||.||
BSU34790___tr 901 GTACAACATTATGTCGAAGAGCTCCAAGAAACGCTGAAAACCTTAAAATA 950
BSNT_05296___ 930 - 930
BSU34790___tr 951 A 951
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