Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05284 and BSU34700

See DNA alignment / Visit BSNT_05284 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:58
# Commandline: needle
#    -asequence pep-align/BSNT_05284___yvcR.1.22522.seq
#    -bsequence pep-align/BSU34700___yvcR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05284___yvcR-BSU34700___yvcR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05284___yvcR-BSU34700___yvcR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05284___yvcR
# 2: BSU34700___yvcR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 259
# Identity:     257/259 (99.2%)
# Similarity:   257/259 (99.2%)
# Gaps:           0/259 ( 0.0%)
# Score: 1297.0
# 
#
#=======================================

BSNT_05284___      1 MNVLQTTNLSKTYYSNKGTISYQALSAFDLSVSKGEFVGIMGPSGSGKTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34700___yv      1 MNVLQTTNLSKTYYSNKGTISYQALSAFDLSVSKGEFVGIMGPSGSGKTT     50

BSNT_05284___     51 LLNLLATIDKPTQGEMMINGIQPKTLKDQELALFRRRELGFVFQDFNLLD    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34700___yv     51 LLNLLATIDKPTQGEMMINGIQPKTLKDQELALFRRRELGFVFQDFNLLD    100

BSNT_05284___    101 TLTIRENILLPLALDKVKLREMEARLDELADTLQIKHILDHRTYEVSGGQ    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34700___yv    101 TLTIRENILLPLALDKVKLREMEARLDELADTLQIKHILDHRTYEVSGGQ    150

BSNT_05284___    151 QQRAACARAIIHNPALILADEPTGNLDSKSAKQVMNTLAQLNEEKEATTL    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU34700___yv    151 QQRAACARAIIHNPALILADEPTGNLDSKSAKQVMNTLAQLNEEKEATIL    200

BSNT_05284___    201 LVTHDATAASFCKRIVFIKDGRFFSEIHRGINRQVFYQSILDTLSVLGGD    250
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU34700___yv    201 LVTHDATAASFCKRIVFIKDGRFFSEIHRGTNRQVFYQSILDTLSVLGGD    250

BSNT_05284___    251 FHEFENYRP    259
                     |||||||||
BSU34700___yv    251 FHEFENYRP    259


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