Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05284 and BSU34700

See Amino acid alignment / Visit BSNT_05284 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:58
# Commandline: needle
#    -asequence dna-align/BSNT_05284___yvcR.1.22522.seq
#    -bsequence dna-align/BSU34700___yvcR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05284___yvcR-BSU34700___yvcR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05284___yvcR-BSU34700___yvcR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05284___yvcR
# 2: BSU34700___yvcR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 780
# Identity:     770/780 (98.7%)
# Similarity:   770/780 (98.7%)
# Gaps:           0/780 ( 0.0%)
# Score: 3810.0
# 
#
#=======================================

BSNT_05284___      1 ATGAACGTGTTGCAAACAACGAACCTATCGAAAACGTACTATTCAAATAA     50
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU34700___yv      1 ATGAACGTGTTGCAAACAACGAACCTATCGAAAACATACTATTCAAATAA     50

BSNT_05284___     51 AGGAACAATATCATACCAAGCGCTCAGCGCCTTTGATCTCAGTGTGTCAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34700___yv     51 AGGAACAATATCATACCAAGCGCTCAGCGCCTTTGATCTCAGTGTGTCAA    100

BSNT_05284___    101 AAGGGGAATTTGTCGGGATTATGGGGCCGTCGGGAAGCGGAAAAACCACG    150
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU34700___yv    101 AAGGAGAATTTGTCGGGATTATGGGGCCGTCGGGAAGCGGAAAAACCACG    150

BSNT_05284___    151 CTTTTGAATTTGCTGGCTACCATTGATAAGCCGACCCAGGGCGAGATGAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34700___yv    151 CTTTTGAATTTGCTGGCTACCATTGATAAGCCGACCCAGGGCGAGATGAT    200

BSNT_05284___    201 GATCAACGGCATTCAGCCGAAAACGTTAAAGGACCAAGAGCTGGCTTTGT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34700___yv    201 GATCAACGGCATTCAGCCGAAAACGTTAAAGGACCAAGAGCTGGCTTTGT    250

BSNT_05284___    251 TTCGCAGAAGAGAACTCGGCTTCGTCTTTCAGGATTTTAATCTGCTTGAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34700___yv    251 TTCGCAGAAGAGAACTCGGCTTCGTCTTTCAGGATTTTAATCTGCTTGAT    300

BSNT_05284___    301 ACGCTGACGATTCGTGAAAATATTCTCTTGCCGCTCGCATTGGATAAGGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34700___yv    301 ACGCTGACGATTCGTGAAAATATTCTCTTGCCGCTCGCATTGGATAAGGT    350

BSNT_05284___    351 AAAGCTGAGAGAAATGGAAGCCCGATTGGATGAACTGGCGGATACGCTGC    400
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU34700___yv    351 AAAGCTGAGAGAAATGGAAGCTCGATTGGATGAACTGGCGGATACGCTGC    400

BSNT_05284___    401 AAATCAAGCATATTCTCGATCACCGCACATATGAGGTGTCGGGCGGACAG    450
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU34700___yv    401 AAATAAAGCATATTCTCGATCACCGCACATATGAGGTGTCGGGCGGACAG    450

BSNT_05284___    451 CAGCAGCGGGCAGCCTGTGCCAGAGCGATTATTCACAATCCGGCGCTCAT    500
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU34700___yv    451 CAGCAGCGGGCAGCTTGTGCCAGAGCGATTATTCACAATCCGGCGCTCAT    500

BSNT_05284___    501 TCTTGCTGATGAACCGACAGGAAACCTCGACTCAAAATCGGCAAAGCAAG    550
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU34700___yv    501 TCTTGCCGATGAACCGACAGGAAACCTCGACTCAAAATCGGCAAAGCAAG    550

BSNT_05284___    551 TGATGAACACACTGGCTCAGCTGAATGAGGAAAAGGAAGCGACGACTCTG    600
                     |||||||||||||||||||||||||||||||||||||||||||||.|.||
BSU34700___yv    551 TGATGAACACACTGGCTCAGCTGAATGAGGAAAAGGAAGCGACGATTTTG    600

BSNT_05284___    601 TTGGTTACGCATGATGCCACAGCAGCAAGTTTCTGTAAACGAATTGTTTT    650
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU34700___yv    601 TTGGTTACGCATGATGCCACAGCAGCAAGTTTCTGTAAACGGATTGTTTT    650

BSNT_05284___    651 TATTAAAGACGGACGTTTCTTTTCAGAGATTCACAGAGGAATAAACAGGC    700
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU34700___yv    651 TATTAAAGACGGACGTTTCTTTTCAGAGATTCACAGAGGAACAAACAGGC    700

BSNT_05284___    701 AGGTGTTTTATCAAAGTATATTGGATACCTTGAGTGTGTTGGGAGGCGAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34700___yv    701 AGGTGTTTTATCAAAGTATATTGGATACCTTGAGTGTGTTGGGAGGCGAT    750

BSNT_05284___    751 TTTCATGAATTTGAGAACTATCGCCCGTAA    780
                     ||||||||||||||||||||||||||||||
BSU34700___yv    751 TTTCATGAATTTGAGAACTATCGCCCGTAA    780


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