Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05211 and BSU34500

See DNA alignment / Visit BSNT_05211 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:54
# Commandline: needle
#    -asequence pep-align/BSNT_05211___yvdR.1.22522.seq
#    -bsequence pep-align/BSU34500___yvdR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05211___yvdR-BSU34500___yvdR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05211___yvdR-BSU34500___yvdR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05211___yvdR
# 2: BSU34500___yvdR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 106
# Identity:     105/106 (99.1%)
# Similarity:   106/106 (100.0%)
# Gaps:           0/106 ( 0.0%)
# Score: 529.0
# 
#
#=======================================

BSNT_05211___      1 MAWFLLVIAGIEEIIAAIAMKYIDGTRKKWPIIVMTLGFGLSFYCLSQAM     50
                     ||||||||||||||||||||||||||||||||||||:|||||||||||||
BSU34500___yv      1 MAWFLLVIAGIEEIIAAIAMKYIDGTRKKWPIIVMTVGFGLSFYCLSQAM     50

BSNT_05211___     51 IVLPAGVAYAVWTGIGSIGVSAVGLIWFKERFQLSQVISLCLILAGVIGL    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34500___yv     51 IVLPAGVAYAVWTGIGSIGVSAVGLIWFKERFQLSQVISLCLILAGVIGL    100

BSNT_05211___    101 RLTSSS    106
                     ||||||
BSU34500___yv    101 RLTSSS    106


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.