Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05211 and BSU34500

See Amino acid alignment / Visit BSNT_05211 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:54
# Commandline: needle
#    -asequence dna-align/BSNT_05211___yvdR.1.22522.seq
#    -bsequence dna-align/BSU34500___yvdR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05211___yvdR-BSU34500___yvdR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05211___yvdR-BSU34500___yvdR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05211___yvdR
# 2: BSU34500___yvdR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     311/321 (96.9%)
# Similarity:   311/321 (96.9%)
# Gaps:           0/321 ( 0.0%)
# Score: 1515.0
# 
#
#=======================================

BSNT_05211___      1 ATGGCATGGTTTTTATTAGTGATTGCCGGCATTGAAGAAATTATAGCTGC     50
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU34500___yv      1 ATGGCATGGTTTTTATTAGTGATTGCCGGCATAGAAGAAATTATAGCTGC     50

BSNT_05211___     51 CATTGCCATGAAATATATTGATGGGACAAGAAAAAAATGGCCGATCATTG    100
                     ||||||||||||||||||.||.||.|||||||||||||||||||||||||
BSU34500___yv     51 CATTGCCATGAAATATATAGACGGAACAAGAAAAAAATGGCCGATCATTG    100

BSNT_05211___    101 TGATGACGCTTGGATTCGGCTTATCCTTTTACTGCCTGTCCCAAGCGATG    150
                     |||||||..|||||||||||||||||||||||||||||||||||||||||
BSU34500___yv    101 TGATGACTGTTGGATTCGGCTTATCCTTTTACTGCCTGTCCCAAGCGATG    150

BSNT_05211___    151 ATCGTCCTGCCTGCCGGAGTCGCTTATGCCGTCTGGACCGGCATTGGCAG    200
                     |||||||||||||||||||||||.||||||||||||||.||||||||.||
BSU34500___yv    151 ATCGTCCTGCCTGCCGGAGTCGCATATGCCGTCTGGACTGGCATTGGAAG    200

BSNT_05211___    201 CATTGGCGTTTCGGCGGTCGGGCTCATCTGGTTTAAGGAGCGGTTTCAGC    250
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU34500___yv    201 CATTGGTGTTTCGGCGGTCGGGCTCATCTGGTTTAAGGAGCGGTTTCAGC    250

BSNT_05211___    251 TTTCACAGGTGATTTCACTTTGCCTTATCCTAGCCGGCGTCATCGGCCTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34500___yv    251 TTTCACAGGTGATTTCACTTTGCCTTATCCTAGCCGGCGTCATCGGCCTG    300

BSNT_05211___    301 CGTCTTACGTCATCTTCATAA    321
                     |||||||||||||||||||||
BSU34500___yv    301 CGTCTTACGTCATCTTCATAA    321


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