Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05126 and BSU33890

See DNA alignment / Visit BSNT_05126 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:41
# Commandline: needle
#    -asequence pep-align/BSNT_05126___yvbK.1.22522.seq
#    -bsequence pep-align/BSU33890___yvbK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05126___yvbK-BSU33890___yvbK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05126___yvbK-BSU33890___yvbK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05126___yvbK
# 2: BSU33890___yvbK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 155
# Identity:     116/155 (74.8%)
# Similarity:   133/155 (85.8%)
# Gaps:           2/155 ( 1.3%)
# Score: 614.0
# 
#
#=======================================

BSNT_05126___      1 --MQHLTIQKATNFDQPLYELLLLADPSKEIVDDYLVRGECYTGYISGEL     48
                       ||.|.|:.....:..||:|||||||||:|||:||.||||||.:...||
BSU33890___yv      1 MNMQKLRIELGEETNDELYDLLLLADPSKDIVDEYLERGECYTAWAGDEL     50

BSNT_05126___     49 AGVYVIITTRPQTVEIVNIAVKQTMQKQGIGKLLILDAIEKAKHMGAKVI     98
                     |||||::.||||||||||||||:::||:|.||.|:||||||||.:||..|
BSU33890___yv     51 AGVYVLLKTRPQTVEIVNIAVKESLQKKGFGKQLVLDAIEKAKKLGADTI    100

BSNT_05126___     99 EIGTGNSSIHQLSLYQKCGFRLQAIDHDFFIRHYDEEIFENGIQCRDMVR    148
                     |||||||||||||||||||||:||||||||:|||||:|||||||||||||
BSU33890___yv    101 EIGTGNSSIHQLSLYQKCGFRIQAIDHDFFLRHYDEDIFENGIQCRDMVR    150

BSNT_05126___    149 LYLDL    153
                     |||||
BSU33890___yv    151 LYLDL    155


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.