Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05126 and BSU33890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:42
# Commandline: needle
# -asequence dna-align/BSNT_05126___yvbK.1.22522.seq
# -bsequence dna-align/BSU33890___yvbK.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05126___yvbK-BSU33890___yvbK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05126___yvbK-BSU33890___yvbK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05126___yvbK
# 2: BSU33890___yvbK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 485
# Identity: 353/485 (72.8%)
# Similarity: 353/485 (72.8%)
# Gaps: 40/485 ( 8.2%)
# Score: 1285.0
#
#
#=======================================
BSNT_05126___ 1 ------ATGCAACACCTCACCATTCA------AAAAGCAACAAACTTTGA 38
||||||.|.||||..|||.| |.|||.|||||| |||
BSU33890___yv 1 ATGAATATGCAAAAGCTCAGGATTGAATTAGGAGAAGAAACAAA---TGA 47
BSNT_05126___ 39 TCAACCGCTGTATGAGCTTCTGCTGCTCGCCGATCCGTCAAAAGAAATTG 88
..|| .|.|||||.||..||||||||||||||||.||.|||||.||||
BSU33890___yv 48 CGAA---TTATATGATCTATTGCTGCTCGCCGATCCATCGAAAGACATTG 94
BSNT_05126___ 89 TTGATGACTA-CTTGGTCAGA--GGAGAATGCTACACAGGTTATATATCA 135
|.|||||.|| |||| ||| ||||||||.|||||||.||
BSU33890___yv 95 TAGATGAATATCTTG---AGAGGGGAGAATGTTACACAGCTT-------- 133
BSNT_05126___ 136 GG--CG--AATTAGCT----GGTGTATACGTGATCATCACAACTAGGCCA 177
|| || .||.|||| ||.||.||.||..|..|.|.|||.|||||.
BSU33890___yv 134 GGGCCGGTGATGAGCTTGCAGGGGTTTATGTATTGCTAAAAACAAGGCCG 183
BSNT_05126___ 178 CAAACGGTAGAAATCGTTAACATCGCAGTAAAACAAACAATGCAAAAACA 227
|||||.||.|||||.||.||.||.||.||||||.||.|..|.||.||..|
BSU33890___yv 184 CAAACAGTTGAAATTGTAAATATTGCGGTAAAAGAATCTCTTCAGAAGAA 233
BSNT_05126___ 228 GGGCATTGGCAAGCTTCTTATCCTCGACGCCATTGAAAAAGCGAAACACA 277
.|||.|||||||.|..|||.|.||.||||||||.|||||||||||..|..
BSU33890___yv 234 AGGCTTTGGCAAACAGCTTGTACTTGACGCCATCGAAAAAGCGAAGAAGC 283
BSNT_05126___ 278 TGGGAGCAAAGGTGATTGAAATAGGTACTGGAAATTCAAGCATCCATCAA 327
||||.||..|...|||||||||.||.||.||.|||||.|||||.|||||.
BSU33890___yv 284 TGGGGGCGGACACGATTGAAATCGGAACGGGGAATTCGAGCATTCATCAG 333
BSNT_05126___ 328 TTGTCTCTATATCAAAAATGCGGATTTCGCCTTCAAGCGATCGACCATGA 377
.|.||.||.|||||||||||||||||.|||.||||.|||||||||||.||
BSU33890___yv 334 CTTTCCCTCTATCAAAAATGCGGATTCCGCATTCAGGCGATCGACCACGA 383
BSNT_05126___ 378 TTTTTTTATCAGACACTACGACGAGGAGATTTTTGAAAACGGCATTCAAT 427
|||.|||.|||||||.||.||.|||||.||||||||||||||.|||||||
BSU33890___yv 384 TTTCTTTCTCAGACATTATGATGAGGACATTTTTGAAAACGGGATTCAAT 433
BSNT_05126___ 428 GCCGTGATATGGTGAGGCTTTATTTGGATCTCTGA 462
||||.||||||||.|||||||||||||||||||||
BSU33890___yv 434 GCCGCGATATGGTAAGGCTTTATTTGGATCTCTGA 468
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