Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06191 and BSU33790

See DNA alignment / Visit BSNT_06191 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:49
# Commandline: needle
#    -asequence pep-align/BSNT_06191.1.22522.seq
#    -bsequence pep-align/BSU33790___sdpR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06191-BSU33790___sdpR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06191-BSU33790___sdpR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06191
# 2: BSU33790___sdpR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 97
# Identity:      45/97 (46.4%)
# Similarity:    55/97 (56.7%)
# Gaps:          26/97 (26.8%)
# Score: 227.0
# 
#
#=======================================

BSNT_06191         1 ----------------MDLLKQQDLTAGQIADQFDMSKPSISHHLNILKN     34
                                     :||||..|:|||.||:.|::|||||||||||||.
BSU33790___sd      1 MNNVFKAISDPTRRKILDLLKGGDMTAGDIAEHFNISKPSISHHLNILKQ     50

BSNT_06191        35 TDLVRDQKKGQFIIYSLNTTVLQDLIGW---FFSLTDTDHDKKEGGE     78
                     .:::.|.:|||||.||||||||||.|.|   |.:..|.|.       
BSU33790___sd     51 AEVISDHRKGQFIYYSLNTTVLQDSINWMLNFINKGDNDL-------     90


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