Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05098 and BSU33640

See DNA alignment / Visit BSNT_05098 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:38
# Commandline: needle
#    -asequence pep-align/BSNT_05098___yvaM.1.22522.seq
#    -bsequence pep-align/BSU33640___yvaM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05098___yvaM-BSU33640___yvaM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05098___yvaM-BSU33640___yvaM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05098___yvaM
# 2: BSU33640___yvaM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 257
# Identity:     253/257 (98.4%)
# Similarity:   255/257 (99.2%)
# Gaps:           1/257 ( 0.4%)
# Score: 1375.0
# 
#
#=======================================

BSNT_05098___      1 MPLISIDSRKHLFYEEYGQGIPIIFIHPPGMGRKVFYYQRLLSKHFRVIF     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33640___yv      1 MPLISIDSRKHLFYEEYGQGIPIIFIHPPGMGRKVFYYQRLLSKHFRVIF     50

BSNT_05098___     51 PDLSGHGDSDHIDQPASISYYANEIAQFMDALHIDKAVLFGYSAGGLIAQ    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33640___yv     51 PDLSGHGDSDHIDQPASISYYANEIAQFMDALHIDKAVLFGYSAGGLIAQ    100

BSNT_05098___    101 HIGFTRPDKVSHLILSGAYPAVHNVIGQKLHKLGMYLLEKNPGLLMKILA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33640___yv    101 HIGFTRPDKVSHLILSGAYPAVHNVIGQKLHKLGMYLLEKNPGLLMKILA    150

BSNT_05098___    151 GSHTKDRQLRSILTDHMKKADQAHWHQYYLDSLGYNCIEQLPRLDMPMLF    200
                     ||||||||||||||||||||||||||||||||||||||||||||:|||||
BSU33640___yv    151 GSHTKDRQLRSILTDHMKKADQAHWHQYYLDSLGYNCIEQLPRLEMPMLF    200

BSNT_05098___    201 MYGGLRDWTFTNAGYYRRACRHAEFFRLEYQGHQLPTKQWKTCNELVTGF    250
                     ||||||||||||||||||:|||||||||||||||||||||||||||||||
BSU33640___yv    201 MYGGLRDWTFTNAGYYRRSCRHAEFFRLEYQGHQLPTKQWKTCNELVTGF    250

BSNT_05098___    251 VLTQHSR    257
                     |||.|| 
BSU33640___yv    251 VLTHHS-    256


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