Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05098 and BSU33640

See Amino acid alignment / Visit BSNT_05098 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:38
# Commandline: needle
#    -asequence dna-align/BSNT_05098___yvaM.1.22522.seq
#    -bsequence dna-align/BSU33640___yvaM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05098___yvaM-BSU33640___yvaM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05098___yvaM-BSU33640___yvaM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05098___yvaM
# 2: BSU33640___yvaM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 774
# Identity:     763/774 (98.6%)
# Similarity:   763/774 (98.6%)
# Gaps:           3/774 ( 0.4%)
# Score: 3772.0
# 
#
#=======================================

BSNT_05098___      1 ATGCCGCTTATCAGCATAGACAGCAGGAAACATCTTTTTTATGAAGAATA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33640___yv      1 ATGCCGCTTATCAGCATAGACAGCAGGAAACATCTTTTTTATGAAGAATA     50

BSNT_05098___     51 TGGACAGGGAATCCCTATCATTTTTATCCACCCGCCGGGCATGGGACGCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU33640___yv     51 TGGACAGGGAATCCCTATCATTTTTATCCACCCGCCGGGCATGGGACGAA    100

BSNT_05098___    101 AGGTTTTTTATTATCAGCGCCTTCTATCCAAACATTTCAGGGTGATTTTT    150
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU33640___yv    101 AGGTTTTTTATTATCAGCGCCTTCTATCCAAGCATTTCAGGGTGATTTTT    150

BSNT_05098___    151 CCCGATTTAAGCGGCCACGGTGATAGTGATCACATCGATCAGCCAGCGTC    200
                     ||.||||||||.||||||||||||||||||||||||||||||||||||||
BSU33640___yv    151 CCGGATTTAAGTGGCCACGGTGATAGTGATCACATCGATCAGCCAGCGTC    200

BSNT_05098___    201 TATTTCCTATTACGCAAACGAGATCGCGCAATTCATGGACGCTTTGCACA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33640___yv    201 TATTTCCTATTACGCAAACGAGATCGCGCAATTCATGGACGCTTTGCACA    250

BSNT_05098___    251 TTGATAAAGCTGTGTTATTCGGGTATTCTGCCGGAGGCTTAATCGCGCAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33640___yv    251 TTGATAAAGCTGTGTTATTCGGGTATTCTGCCGGAGGCTTAATCGCGCAG    300

BSNT_05098___    301 CATATCGGCTTCACCCGCCCGGACAAAGTGTCACACCTTATTCTGTCCGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33640___yv    301 CATATCGGCTTCACCCGCCCGGACAAAGTGTCACACCTTATTCTGTCCGG    350

BSNT_05098___    351 CGCCTACCCCGCTGTTCATAACGTAATCGGCCAGAAGCTGCACAAACTGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33640___yv    351 CGCCTACCCCGCTGTTCATAACGTAATCGGCCAGAAGCTGCACAAACTGG    400

BSNT_05098___    401 GAATGTATCTGCTTGAAAAAAACCCCGGTTTGCTCATGAAAATCCTCGCT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33640___yv    401 GAATGTATCTGCTTGAAAAAAACCCCGGTTTGCTCATGAAAATCCTCGCT    450

BSNT_05098___    451 GGCAGCCACACAAAAGACAGACAGCTTCGCAGCATATTAACAGACCATAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33640___yv    451 GGCAGCCACACAAAAGACAGACAGCTTCGCAGCATATTAACAGACCATAT    500

BSNT_05098___    501 GAAAAAAGCAGACCAGGCCCATTGGCATCAGTATTATCTGGATTCGCTTG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33640___yv    501 GAAAAAAGCAGACCAGGCCCATTGGCATCAGTATTATCTGGATTCGCTTG    550

BSNT_05098___    551 GCTACAACTGCATTGAACAGCTGCCCCGCCTAGACATGCCAATGCTGTTT    600
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU33640___yv    551 GCTACAACTGCATTGAACAGCTGCCCCGCCTAGAAATGCCAATGCTGTTT    600

BSNT_05098___    601 ATGTATGGAGGCCTGCGGGACTGGACCTTTACAAACGCAGGCTATTACCG    650
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU33640___yv    601 ATGTATGGCGGCCTGCGGGACTGGACCTTTACAAACGCAGGCTATTACCG    650

BSNT_05098___    651 AAGAGCGTGCAGACATGCCGAATTTTTCAGATTGGAATATCAGGGACATC    700
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU33640___yv    651 AAGATCGTGCAGACATGCCGAATTTTTCAGATTGGAATATCAGGGACATC    700

BSNT_05098___    701 AATTGCCGACAAAACAATGGAAAACGTGCAATGAGCTGGTGACAGGGTTT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33640___yv    701 AATTGCCGACAAAACAATGGAAAACGTGCAATGAGCTGGTGACAGGGTTT    750

BSNT_05098___    751 GTGCTGACACAACATTCAAGATAG    774
                     |||||||||||.|||||   ||||
BSU33640___yv    751 GTGCTGACACATCATTC---ATAG    771


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